Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC020922.3-201ENST00000595064 547 ntBASIC17.43■□□□□ 0.38
TRIM47Q96LD4 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.43■□□□□ 0.38
TRIM47Q96LD4 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC17.43■□□□□ 0.38
TRIM47Q96LD4 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.43■□□□□ 0.38
TRIM47Q96LD4 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM47Q96LD4 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM47Q96LD4 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.43■□□□□ 0.38
TRIM47Q96LD4 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TRIM47Q96LD4 AC004899.1-201ENST00000424687 1714 ntBASIC17.43■□□□□ 0.38
TRIM47Q96LD4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM47Q96LD4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRIM47Q96LD4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM47Q96LD4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.43■□□□□ 0.38
TRIM47Q96LD4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TRIM47Q96LD4 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM47Q96LD4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 FGFR3P1-201ENST00000449999 601 ntBASIC17.42■□□□□ 0.38
TRIM47Q96LD4 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 AC103988.2-201ENST00000561804 725 ntBASIC17.42■□□□□ 0.38
TRIM47Q96LD4 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 RN7SL163P-201ENST00000583100 276 ntBASIC17.42■□□□□ 0.38
TRIM47Q96LD4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 RN7SL736P-201ENST00000613111 269 ntBASIC17.42■□□□□ 0.38
TRIM47Q96LD4 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.42■□□□□ 0.38
TRIM47Q96LD4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 AC006335.1-201ENST00000445200 547 ntBASIC17.41■□□□□ 0.38
TRIM47Q96LD4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 AC004066.1-201ENST00000502488 802 ntBASIC17.41■□□□□ 0.38
TRIM47Q96LD4 MARK2P5-201ENST00000507649 634 ntBASIC17.41■□□□□ 0.38
TRIM47Q96LD4 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 AC068587.8-201ENST00000641239 219 ntBASIC17.41■□□□□ 0.38
TRIM47Q96LD4 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM47Q96LD4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms