Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC15.08■□□□□ 0
CHMP6Q96FZ7 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CHMP6Q96FZ7 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC15.08■□□□□ 0
CHMP6Q96FZ7 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CHMP6Q96FZ7 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CHMP6Q96FZ7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.08■□□□□ 0
CHMP6Q96FZ7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.08■□□□□ 0
CHMP6Q96FZ7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CHMP6Q96FZ7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.08■□□□□ 0
CHMP6Q96FZ7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.08■□□□□ 0
CHMP6Q96FZ7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.08■□□□□ 0
CHMP6Q96FZ7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.08■□□□□ 0
CHMP6Q96FZ7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CHMP6Q96FZ7 ALG1L5P-201ENST00000482043 771 ntBASIC15.08■□□□□ 0
CHMP6Q96FZ7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.08■□□□□ 0
CHMP6Q96FZ7 AC079140.1-201ENST00000508039 487 ntBASIC15.08■□□□□ 0
CHMP6Q96FZ7 PGAM5P1-201ENST00000518923 814 ntBASIC15.08■□□□□ 0
CHMP6Q96FZ7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.08■□□□□ 0
CHMP6Q96FZ7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.08■□□□□ 0
CHMP6Q96FZ7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.08■□□□□ 0
CHMP6Q96FZ7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CHMP6Q96FZ7 AC025181.2-201ENST00000606994 802 ntBASIC15.08■□□□□ 0
CHMP6Q96FZ7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.08■□□□□ 0
CHMP6Q96FZ7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.08■□□□□ 0
CHMP6Q96FZ7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CHMP6Q96FZ7 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CHMP6Q96FZ7 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
CHMP6Q96FZ7 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.08■□□□□ 0
CHMP6Q96FZ7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CHMP6Q96FZ7 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC15.08■□□□□ 0
CHMP6Q96FZ7 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.08■□□□□ 0
CHMP6Q96FZ7 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CHMP6Q96FZ7 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CHMP6Q96FZ7 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.08■□□□□ 0
CHMP6Q96FZ7 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CHMP6Q96FZ7 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.08■□□□□ 0
CHMP6Q96FZ7 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC15.08■□□□□ 0
CHMP6Q96FZ7 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC15.08■□□□□ 0
CHMP6Q96FZ7 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC15.08■□□□□ 0
CHMP6Q96FZ7 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CHMP6Q96FZ7 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC15.08■□□□□ 0
CHMP6Q96FZ7 OS9-218ENST00000551035 2246 ntTSL 2 BASIC15.08■□□□□ 0
CHMP6Q96FZ7 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CHMP6Q96FZ7 TET3-201ENST00000305799 5174 ntTSL 5 BASIC15.08■□□□□ 0
CHMP6Q96FZ7 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CHMP6Q96FZ7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.07■□□□□ 0
CHMP6Q96FZ7 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
CHMP6Q96FZ7 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CHMP6Q96FZ7 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC15.07■□□□□ 0
CHMP6Q96FZ7 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
CHMP6Q96FZ7 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC15.07■□□□□ 0
CHMP6Q96FZ7 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC15.07■□□□□ 0
CHMP6Q96FZ7 TSN-212ENST00000536142 3328 ntTSL 2 BASIC15.07■□□□□ 0
CHMP6Q96FZ7 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
CHMP6Q96FZ7 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.07■□□□□ 0
CHMP6Q96FZ7 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
CHMP6Q96FZ7 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC15.07■□□□□ 0
CHMP6Q96FZ7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CHMP6Q96FZ7 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC15.07■□□□□ 0
CHMP6Q96FZ7 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CHMP6Q96FZ7 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHMP6Q96FZ7 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC15.07■□□□□ 0
CHMP6Q96FZ7 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC15.07■□□□□ 0
CHMP6Q96FZ7 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CHMP6Q96FZ7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHMP6Q96FZ7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.07■□□□□ 0
CHMP6Q96FZ7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.07■□□□□ 0
CHMP6Q96FZ7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
CHMP6Q96FZ7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CHMP6Q96FZ7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
CHMP6Q96FZ7 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
CHMP6Q96FZ7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CHMP6Q96FZ7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.07■□□□□ 0
CHMP6Q96FZ7 AL592309.1-201ENST00000443127 649 ntBASIC15.07■□□□□ 0
CHMP6Q96FZ7 ACTG1P14-201ENST00000446382 1122 ntBASIC15.07■□□□□ 0
CHMP6Q96FZ7 DNAJB3-201ENST00000446806 729 ntBASIC15.07■□□□□ 0
CHMP6Q96FZ7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.07■□□□□ 0
CHMP6Q96FZ7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.07■□□□□ 0
CHMP6Q96FZ7 KRT8P48-201ENST00000515599 1220 ntBASIC15.07■□□□□ 0
CHMP6Q96FZ7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.07■□□□□ 0
CHMP6Q96FZ7 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CHMP6Q96FZ7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CHMP6Q96FZ7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
CHMP6Q96FZ7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
CHMP6Q96FZ7 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CHMP6Q96FZ7 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHMP6Q96FZ7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CHMP6Q96FZ7 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHMP6Q96FZ7 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC15.07■□□□□ 0
CHMP6Q96FZ7 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.07■□□□□ 0
CHMP6Q96FZ7 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
CHMP6Q96FZ7 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC15.07■□□□□ 0
CHMP6Q96FZ7 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC15.07■□□□□ 0
CHMP6Q96FZ7 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.07■□□□□ 0
CHMP6Q96FZ7 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP6Q96FZ7 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP6Q96FZ7 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP6Q96FZ7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.06■□□□□ 0
CHMP6Q96FZ7 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CHMP6Q96FZ7 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 280 ms