Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DDX11Q96FC9 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC17.75■□□□□ 0.43
DDX11Q96FC9 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DDX11Q96FC9 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX11Q96FC9 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX11Q96FC9 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
DDX11Q96FC9 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DDX11Q96FC9 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX11Q96FC9 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX11Q96FC9 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX11Q96FC9 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX11Q96FC9 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX11Q96FC9 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
DDX11Q96FC9 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
DDX11Q96FC9 CNN2P8-201ENST00000421872 913 ntBASIC17.75■□□□□ 0.43
DDX11Q96FC9 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DDX11Q96FC9 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.75■□□□□ 0.43
DDX11Q96FC9 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.75■□□□□ 0.43
DDX11Q96FC9 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DDX11Q96FC9 AC108725.1-201ENST00000495472 409 ntBASIC17.75■□□□□ 0.43
DDX11Q96FC9 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.75■□□□□ 0.43
DDX11Q96FC9 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.75■□□□□ 0.43
DDX11Q96FC9 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.75■□□□□ 0.43
DDX11Q96FC9 AC025279.2-201ENST00000569730 653 ntBASIC17.75■□□□□ 0.43
DDX11Q96FC9 AC009542.2-202ENST00000619004 1067 ntBASIC17.75■□□□□ 0.43
DDX11Q96FC9 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.75■□□□□ 0.43
DDX11Q96FC9 AC008687.7-202ENST00000637404 953 ntBASIC17.75■□□□□ 0.43
DDX11Q96FC9 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DDX11Q96FC9 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
DDX11Q96FC9 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
DDX11Q96FC9 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX11Q96FC9 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX11Q96FC9 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX11Q96FC9 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
DDX11Q96FC9 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX11Q96FC9 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX11Q96FC9 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX11Q96FC9 FES-203ENST00000394302 2133 ntTSL 5 BASIC17.75■□□□□ 0.43
DDX11Q96FC9 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.75■□□□□ 0.43
DDX11Q96FC9 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.75■□□□□ 0.43
DDX11Q96FC9 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.75■□□□□ 0.43
DDX11Q96FC9 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17.75■□□□□ 0.43
DDX11Q96FC9 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17.75■□□□□ 0.43
DDX11Q96FC9 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX11Q96FC9 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX11Q96FC9 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.75■□□□□ 0.43
DDX11Q96FC9 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX11Q96FC9 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDX11Q96FC9 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC17.74■□□□□ 0.43
DDX11Q96FC9 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDX11Q96FC9 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC17.74■□□□□ 0.43
DDX11Q96FC9 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC17.74■□□□□ 0.43
DDX11Q96FC9 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDX11Q96FC9 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DDX11Q96FC9 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.74■□□□□ 0.43
DDX11Q96FC9 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.74■□□□□ 0.43
DDX11Q96FC9 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDX11Q96FC9 AL133338.1-201ENST00000565695 1517 ntBASIC17.74■□□□□ 0.43
DDX11Q96FC9 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDX11Q96FC9 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.74■□□□□ 0.43
DDX11Q96FC9 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDX11Q96FC9 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
DDX11Q96FC9 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDX11Q96FC9 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
DDX11Q96FC9 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.74■□□□□ 0.43
DDX11Q96FC9 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDX11Q96FC9 RPL13AP20-201ENST00000459725 609 ntBASIC17.74■□□□□ 0.43
DDX11Q96FC9 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
DDX11Q96FC9 RN7SL560P-201ENST00000577943 264 ntBASIC17.74■□□□□ 0.43
DDX11Q96FC9 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.74■□□□□ 0.43
DDX11Q96FC9 AC145423.3-201ENST00000615987 467 ntBASIC17.74■□□□□ 0.43
DDX11Q96FC9 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
DDX11Q96FC9 BX539320.1-201ENST00000623759 877 ntBASIC17.74■□□□□ 0.43
DDX11Q96FC9 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDX11Q96FC9 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDX11Q96FC9 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDX11Q96FC9 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDX11Q96FC9 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.74■□□□□ 0.43
DDX11Q96FC9 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.74■□□□□ 0.43
DDX11Q96FC9 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
DDX11Q96FC9 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DDX11Q96FC9 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDX11Q96FC9 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDX11Q96FC9 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDX11Q96FC9 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDX11Q96FC9 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.74■□□□□ 0.43
DDX11Q96FC9 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DDX11Q96FC9 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
DDX11Q96FC9 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.73■□□□□ 0.43
DDX11Q96FC9 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DDX11Q96FC9 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.73■□□□□ 0.43
DDX11Q96FC9 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC17.73■□□□□ 0.43
DDX11Q96FC9 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
DDX11Q96FC9 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DDX11Q96FC9 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX11Q96FC9 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX11Q96FC9 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX11Q96FC9 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
DDX11Q96FC9 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX11Q96FC9 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms