Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.24□□□□□ -0.29
APH1AQ96BI3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.24□□□□□ -0.29
APH1AQ96BI3 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.24□□□□□ -0.29
APH1AQ96BI3 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.24□□□□□ -0.29
APH1AQ96BI3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.24□□□□□ -0.29
APH1AQ96BI3 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.24□□□□□ -0.29
APH1AQ96BI3 DUX4L45-201ENST00000566406 1057 ntBASIC13.24□□□□□ -0.29
APH1AQ96BI3 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.24□□□□□ -0.29
APH1AQ96BI3 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.24□□□□□ -0.29
APH1AQ96BI3 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
APH1AQ96BI3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APH1AQ96BI3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APH1AQ96BI3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.24□□□□□ -0.29
APH1AQ96BI3 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APH1AQ96BI3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
APH1AQ96BI3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APH1AQ96BI3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APH1AQ96BI3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APH1AQ96BI3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APH1AQ96BI3 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.24□□□□□ -0.29
APH1AQ96BI3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APH1AQ96BI3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.24□□□□□ -0.29
APH1AQ96BI3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
APH1AQ96BI3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 AC003102.2-201ENST00000589195 1469 ntBASIC13.23□□□□□ -0.29
APH1AQ96BI3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.23□□□□□ -0.29
APH1AQ96BI3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
APH1AQ96BI3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
APH1AQ96BI3 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 AC138969.2-201ENST00000532739 9932 ntBASIC13.23□□□□□ -0.29
APH1AQ96BI3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.23□□□□□ -0.29
APH1AQ96BI3 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
APH1AQ96BI3 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.23□□□□□ -0.29
APH1AQ96BI3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
APH1AQ96BI3 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
APH1AQ96BI3 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.23□□□□□ -0.29
APH1AQ96BI3 CNN2P10-201ENST00000443067 918 ntBASIC13.23□□□□□ -0.29
APH1AQ96BI3 AL355994.2-201ENST00000447882 704 ntBASIC13.23□□□□□ -0.29
APH1AQ96BI3 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.23□□□□□ -0.29
APH1AQ96BI3 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.23□□□□□ -0.29
APH1AQ96BI3 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
APH1AQ96BI3 AP006547.1-201ENST00000563435 692 ntBASIC13.23□□□□□ -0.29
APH1AQ96BI3 PPY2P-201ENST00000582808 702 ntBASIC13.23□□□□□ -0.29
APH1AQ96BI3 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.23□□□□□ -0.29
APH1AQ96BI3 AC073413.1-201ENST00000603927 732 ntBASIC13.23□□□□□ -0.29
APH1AQ96BI3 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
APH1AQ96BI3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.23□□□□□ -0.29
APH1AQ96BI3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
APH1AQ96BI3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.23□□□□□ -0.29
APH1AQ96BI3 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.23□□□□□ -0.29
APH1AQ96BI3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
APH1AQ96BI3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
APH1AQ96BI3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
APH1AQ96BI3 KRT8P4-201ENST00000509735 1454 ntBASIC13.23□□□□□ -0.29
APH1AQ96BI3 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
APH1AQ96BI3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
APH1AQ96BI3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APH1AQ96BI3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.22□□□□□ -0.29
APH1AQ96BI3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
APH1AQ96BI3 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APH1AQ96BI3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.22□□□□□ -0.29
APH1AQ96BI3 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APH1AQ96BI3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.22□□□□□ -0.29
APH1AQ96BI3 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
APH1AQ96BI3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
APH1AQ96BI3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APH1AQ96BI3 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APH1AQ96BI3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.22□□□□□ -0.29
APH1AQ96BI3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.22□□□□□ -0.29
APH1AQ96BI3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APH1AQ96BI3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.22□□□□□ -0.29
APH1AQ96BI3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
APH1AQ96BI3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
APH1AQ96BI3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms