Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
ATP6V0A1Q93050 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 ELK2AP-201ENST00000392510 1007 ntBASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 AL133466.1-201ENST00000447582 150 ntBASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 TUBB8P8-201ENST00000458717 1058 ntBASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 RN7SL769P-201ENST00000469386 295 ntBASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 RN7SL11P-201ENST00000471305 293 ntBASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 AC245884.6-201ENST00000515672 1067 ntBASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 AC022217.1-201ENST00000521069 738 ntBASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 RN7SL774P-201ENST00000577467 290 ntBASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 RN7SL163P-201ENST00000583100 276 ntBASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 AC097724.1-201ENST00000609581 426 ntBASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 AC015967.2-201ENST00000624092 234 ntBASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 AC006435.4-201ENST00000625037 234 ntBASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 AL356737.1-201ENST00000634391 234 ntBASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 AC004923.1-202ENST00000642106 209 ntBASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATP6V0A1Q93050 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 Z97180.1-201ENST00000445173 988 ntBASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 AC013355.1-201ENST00000562625 723 ntBASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 AC100827.2-201ENST00000563214 1194 ntBASIC16.61■□□□□ 0.25
ATP6V0A1Q93050 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms