Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SMIM4Q8WVI0 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 AL139385.1-201ENST00000611744 3272 ntBASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 AP002761.4-201ENST00000565433 3361 ntBASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 TOMM22P5-201ENST00000416399 439 ntBASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 HLA-K-203ENST00000430151 1046 ntBASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 RPL13P2-201ENST00000440687 659 ntBASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 EMBP1-201ENST00000458200 901 ntBASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 AC093909.1-201ENST00000504731 1122 ntBASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 AC079140.1-201ENST00000508039 487 ntBASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 AC091812.2-201ENST00000619081 385 ntBASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 KRT8P35-201ENST00000483942 1338 ntBASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 AL157996.1-201ENST00000624684 2299 ntBASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM4Q8WVI0 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 UNC93B7-201ENST00000509439 705 ntBASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.75□□□□□ -0.37
SMIM4Q8WVI0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms