Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 TSEN15P1-201ENST00000423257 515 ntBASIC12.99□□□□□ -0.33
CCDC107Q8WV48 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 AL512356.2-201ENST00000546955 174 ntBASIC12.99□□□□□ -0.33
CCDC107Q8WV48 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 Z92544.3-201ENST00000624747 417 ntBASIC12.99□□□□□ -0.33
CCDC107Q8WV48 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 TUBB3P1-201ENST00000405796 1332 ntBASIC12.98□□□□□ -0.33
CCDC107Q8WV48 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 MIR1233-2-201ENST00000408138 82 ntBASIC12.98□□□□□ -0.33
CCDC107Q8WV48 MIR1233-1-201ENST00000408722 82 ntBASIC12.98□□□□□ -0.33
CCDC107Q8WV48 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 HLA-J-203ENST00000494367 1087 ntBASIC12.98□□□□□ -0.33
CCDC107Q8WV48 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 AL138828.2-201ENST00000615812 383 ntBASIC12.98□□□□□ -0.33
CCDC107Q8WV48 SPDYE12P-201ENST00000618416 771 ntBASIC12.98□□□□□ -0.33
CCDC107Q8WV48 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.98□□□□□ -0.33
CCDC107Q8WV48 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 AC023090.2-201ENST00000625182 2110 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms