Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 IGLL3P-201ENST00000412472 434 ntBASIC12.45□□□□□ -0.42
ZNF546Q86UE3 HNRNPDP1-201ENST00000439535 754 ntBASIC12.45□□□□□ -0.42
ZNF546Q86UE3 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 AC092910.1-201ENST00000482027 1129 ntBASIC12.45□□□□□ -0.42
ZNF546Q86UE3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 AL445228.2-201ENST00000605589 952 ntBASIC12.45□□□□□ -0.42
ZNF546Q86UE3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 AC010507.1-201ENST00000633895 436 ntBASIC12.45□□□□□ -0.42
ZNF546Q86UE3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
ZNF546Q86UE3 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 AP002761.4-201ENST00000565433 3361 ntBASIC12.44□□□□□ -0.42
ZNF546Q86UE3 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF546Q86UE3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms