Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM5Q71RC9 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SMIM5Q71RC9 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM5Q71RC9 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC18.46■□□□□ 0.55
SMIM5Q71RC9 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SMIM5Q71RC9 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM5Q71RC9 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC18.46■□□□□ 0.55
SMIM5Q71RC9 GCSHP3-201ENST00000431120 391 ntBASIC18.46■□□□□ 0.55
SMIM5Q71RC9 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC18.46■□□□□ 0.55
SMIM5Q71RC9 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM5Q71RC9 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC18.46■□□□□ 0.55
SMIM5Q71RC9 FAM86B3P-203ENST00000523992 854 ntBASIC18.46■□□□□ 0.55
SMIM5Q71RC9 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM5Q71RC9 AC007250.1-201ENST00000608934 338 ntBASIC18.46■□□□□ 0.55
SMIM5Q71RC9 HMGB1P24-201ENST00000611897 328 ntBASIC18.46■□□□□ 0.55
SMIM5Q71RC9 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SMIM5Q71RC9 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC18.46■□□□□ 0.55
SMIM5Q71RC9 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM5Q71RC9 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC18.46■□□□□ 0.55
SMIM5Q71RC9 LINC01815-202ENST00000641468 1409 ntBASIC18.46■□□□□ 0.55
SMIM5Q71RC9 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM5Q71RC9 AC008894.3-201ENST00000624324 3103 ntBASIC18.46■□□□□ 0.55
SMIM5Q71RC9 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.46■□□□□ 0.55
SMIM5Q71RC9 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM5Q71RC9 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SMIM5Q71RC9 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.46■□□□□ 0.55
SMIM5Q71RC9 AC099398.1-201ENST00000567919 2776 ntBASIC18.46■□□□□ 0.55
SMIM5Q71RC9 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM5Q71RC9 MRPL37P1-201ENST00000592451 1337 ntBASIC18.46■□□□□ 0.55
SMIM5Q71RC9 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM5Q71RC9 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC18.46■□□□□ 0.54
SMIM5Q71RC9 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SMIM5Q71RC9 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
SMIM5Q71RC9 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
SMIM5Q71RC9 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.46■□□□□ 0.54
SMIM5Q71RC9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 MIR645-201ENST00000385283 94 ntBASIC18.45■□□□□ 0.54
SMIM5Q71RC9 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 AL512306.1-201ENST00000432698 848 ntBASIC18.45■□□□□ 0.54
SMIM5Q71RC9 ERP29P1-201ENST00000442902 706 ntBASIC18.45■□□□□ 0.54
SMIM5Q71RC9 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 AL139339.2-201ENST00000608063 657 ntBASIC18.45■□□□□ 0.54
SMIM5Q71RC9 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM5Q71RC9 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMIM5Q71RC9 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC18.44■□□□□ 0.54
SMIM5Q71RC9 AL136172.1-201ENST00000598590 1394 ntBASIC18.44■□□□□ 0.54
SMIM5Q71RC9 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SMIM5Q71RC9 AL590440.2-201ENST00000641973 1595 ntBASIC18.44■□□□□ 0.54
SMIM5Q71RC9 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMIM5Q71RC9 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMIM5Q71RC9 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SMIM5Q71RC9 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMIM5Q71RC9 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMIM5Q71RC9 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMIM5Q71RC9 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC18.44■□□□□ 0.54
SMIM5Q71RC9 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC18.44■□□□□ 0.54
SMIM5Q71RC9 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC18.44■□□□□ 0.54
SMIM5Q71RC9 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SMIM5Q71RC9 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC18.44■□□□□ 0.54
SMIM5Q71RC9 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC18.44■□□□□ 0.54
SMIM5Q71RC9 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC18.44■□□□□ 0.54
SMIM5Q71RC9 AC124068.2-201ENST00000569473 1109 ntBASIC18.44■□□□□ 0.54
SMIM5Q71RC9 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC18.44■□□□□ 0.54
SMIM5Q71RC9 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC18.44■□□□□ 0.54
SMIM5Q71RC9 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SMIM5Q71RC9 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMIM5Q71RC9 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMIM5Q71RC9 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.44■□□□□ 0.54
SMIM5Q71RC9 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.44■□□□□ 0.54
SMIM5Q71RC9 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC18.44■□□□□ 0.54
SMIM5Q71RC9 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC18.44■□□□□ 0.54
SMIM5Q71RC9 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC18.44■□□□□ 0.54
SMIM5Q71RC9 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SMIM5Q71RC9 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.44■□□□□ 0.54
SMIM5Q71RC9 BRD7P5-201ENST00000299197 1822 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms