Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 AC018892.3-201ENST00000623986 2499 ntBASIC13.14□□□□□ -0.31
C11orf88Q6PI97 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 TCAF1P1-201ENST00000414990 2232 ntBASIC13.13□□□□□ -0.31
C11orf88Q6PI97 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 AC105233.2-201ENST00000523697 349 ntBASIC13.13□□□□□ -0.31
C11orf88Q6PI97 AF228730.5-201ENST00000530288 346 ntBASIC13.13□□□□□ -0.31
C11orf88Q6PI97 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 AL158211.3-201ENST00000607385 239 ntBASIC13.13□□□□□ -0.31
C11orf88Q6PI97 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 AC089987.1-201ENST00000551654 2209 ntBASIC13.13□□□□□ -0.31
C11orf88Q6PI97 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C11orf88Q6PI97 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.12□□□□□ -0.31
C11orf88Q6PI97 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 MIR346-201ENST00000362234 95 ntBASIC13.12□□□□□ -0.31
C11orf88Q6PI97 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms