Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 TPM3P8-201ENST00000330554 643 ntBASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 CROCCP4-201ENST00000457096 498 ntBASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 AC007551.1-201ENST00000457394 519 ntBASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 KRT90P-201ENST00000549264 1064 ntBASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 AL022328.1-201ENST00000610050 478 ntBASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 AL358472.5-202ENST00000641448 1267 ntBASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 AC067930.6-201ENST00000623257 4947 ntBASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 AL928921.2-201ENST00000641325 2442 ntBASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRAMEF9Q5VWM5 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 AC215219.1-201ENST00000400706 1817 ntBASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 AC016694.1-201ENST00000434179 700 ntBASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 AC005225.4-201ENST00000557330 545 ntBASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 MIR4683-201ENST00000579659 81 ntBASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PRAMEF9Q5VWM5 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms