Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 AL118516.1-201ENST00000564152 670 ntBASIC18.36■□□□□ 0.53
RC3H1Q5TC82 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 AL133467.4-201ENST00000602953 725 ntBASIC18.36■□□□□ 0.53
RC3H1Q5TC82 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RC3H1Q5TC82 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 AL672207.1-201ENST00000328462 1570 ntBASIC18.35■□□□□ 0.53
RC3H1Q5TC82 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 RGS5-216ENST00000449680 788 ntTSL 3 BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 FAM86B3P-203ENST00000523992 854 ntBASIC18.35■□□□□ 0.53
RC3H1Q5TC82 AC012158.2-201ENST00000536546 354 ntBASIC18.35■□□□□ 0.53
RC3H1Q5TC82 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 NDUFB10P1-201ENST00000567319 521 ntBASIC18.35■□□□□ 0.53
RC3H1Q5TC82 AC055811.3-201ENST00000584952 686 ntBASIC18.35■□□□□ 0.53
RC3H1Q5TC82 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 AC021016.3-201ENST00000608367 477 ntBASIC18.35■□□□□ 0.53
RC3H1Q5TC82 LINC00244-201ENST00000625073 613 ntBASIC18.35■□□□□ 0.53
RC3H1Q5TC82 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.35■□□□□ 0.53
RC3H1Q5TC82 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RC3H1Q5TC82 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 AGGF1P1-201ENST00000509500 2073 ntBASIC18.34■□□□□ 0.53
RC3H1Q5TC82 FAM90A21P-201ENST00000510875 1396 ntBASIC18.34■□□□□ 0.53
RC3H1Q5TC82 FAM90A15P-201ENST00000514465 1395 ntBASIC18.34■□□□□ 0.53
RC3H1Q5TC82 FAM90A6P-201ENST00000515148 1394 ntBASIC18.34■□□□□ 0.53
RC3H1Q5TC82 FAM90A16P-201ENST00000526662 1395 ntBASIC18.34■□□□□ 0.53
RC3H1Q5TC82 FAM90A9P-201ENST00000527940 1395 ntBASIC18.34■□□□□ 0.53
RC3H1Q5TC82 FAM90A5P-201ENST00000528738 1395 ntBASIC18.34■□□□□ 0.53
RC3H1Q5TC82 FAM90A14P-201ENST00000530386 1395 ntBASIC18.34■□□□□ 0.53
RC3H1Q5TC82 FAM90A13P-201ENST00000534703 1395 ntBASIC18.34■□□□□ 0.53
RC3H1Q5TC82 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 PCDHA1-201ENST00000378133 2726 ntBASIC18.34■□□□□ 0.53
RC3H1Q5TC82 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RC3H1Q5TC82 SAT1-201ENST00000379251 801 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms