Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC133540.1-201ENST00000620845 1019 ntBASIC17.22■□□□□ 0.35
SHROOM1Q2M3G4 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.22■□□□□ 0.35
SHROOM1Q2M3G4 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.22■□□□□ 0.35
SHROOM1Q2M3G4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SHROOM1Q2M3G4 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SHROOM1Q2M3G4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.22■□□□□ 0.35
SHROOM1Q2M3G4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SHROOM1Q2M3G4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
SHROOM1Q2M3G4 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHROOM1Q2M3G4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SHROOM1Q2M3G4 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
SHROOM1Q2M3G4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHROOM1Q2M3G4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.21■□□□□ 0.34
SHROOM1Q2M3G4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SHROOM1Q2M3G4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SHROOM1Q2M3G4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 AL353637.1-201ENST00000451571 732 ntBASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 RN7SL67P-201ENST00000492147 296 ntBASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 MIR3677-201ENST00000578964 60 ntBASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 YRDCP1-201ENST00000621419 643 ntBASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHROOM1Q2M3G4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms