Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CDK3Q00526 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDK3Q00526 NKAIN1P1-201ENST00000435754 582 ntBASIC14.6□□□□□ -0.07
CDK3Q00526 KLF2P1-201ENST00000447438 1042 ntBASIC14.6□□□□□ -0.07
CDK3Q00526 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.6□□□□□ -0.07
CDK3Q00526 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.6□□□□□ -0.07
CDK3Q00526 AC005324.6-201ENST00000587972 613 ntBASIC14.6□□□□□ -0.07
CDK3Q00526 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CDK3Q00526 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.6□□□□□ -0.07
CDK3Q00526 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDK3Q00526 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDK3Q00526 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDK3Q00526 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDK3Q00526 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDK3Q00526 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDK3Q00526 AC004899.1-201ENST00000424687 1714 ntBASIC14.6□□□□□ -0.07
CDK3Q00526 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDK3Q00526 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDK3Q00526 AP002414.2-201ENST00000591780 3365 ntBASIC14.6□□□□□ -0.07
CDK3Q00526 DBET-201ENST00000630918 3363 ntBASIC14.6□□□□□ -0.07
CDK3Q00526 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.6□□□□□ -0.07
CDK3Q00526 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CDK3Q00526 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDK3Q00526 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDK3Q00526 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.6□□□□□ -0.07
CDK3Q00526 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDK3Q00526 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDK3Q00526 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CDK3Q00526 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDK3Q00526 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDK3Q00526 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CDK3Q00526 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDK3Q00526 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CDK3Q00526 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDK3Q00526 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.59□□□□□ -0.07
CDK3Q00526 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.59□□□□□ -0.07
CDK3Q00526 AC138028.6-201ENST00000616106 1482 ntBASIC14.59□□□□□ -0.07
CDK3Q00526 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDK3Q00526 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDK3Q00526 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDK3Q00526 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDK3Q00526 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.59□□□□□ -0.07
CDK3Q00526 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDK3Q00526 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDK3Q00526 AC012441.2-201ENST00000444843 739 ntBASIC14.59□□□□□ -0.07
CDK3Q00526 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDK3Q00526 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.59□□□□□ -0.07
CDK3Q00526 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.59□□□□□ -0.07
CDK3Q00526 AC106794.1-201ENST00000506935 792 ntBASIC14.59□□□□□ -0.07
CDK3Q00526 AC005740.2-201ENST00000511085 419 ntBASIC14.59□□□□□ -0.07
CDK3Q00526 SCARNA20.5-201ENST00000516991 142 ntBASIC14.59□□□□□ -0.07
CDK3Q00526 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDK3Q00526 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDK3Q00526 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
CDK3Q00526 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.59□□□□□ -0.07
CDK3Q00526 RN7SL163P-201ENST00000583100 276 ntBASIC14.59□□□□□ -0.07
CDK3Q00526 MIR6720-201ENST00000611664 98 ntBASIC14.59□□□□□ -0.07
CDK3Q00526 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.59□□□□□ -0.07
CDK3Q00526 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.59□□□□□ -0.07
CDK3Q00526 AC004923.1-202ENST00000642106 209 ntBASIC14.59□□□□□ -0.07
CDK3Q00526 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CDK3Q00526 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDK3Q00526 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDK3Q00526 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.59□□□□□ -0.07
CDK3Q00526 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDK3Q00526 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.59□□□□□ -0.07
CDK3Q00526 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.59□□□□□ -0.07
CDK3Q00526 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.59□□□□□ -0.07
CDK3Q00526 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CDK3Q00526 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDK3Q00526 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CDK3Q00526 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.59□□□□□ -0.07
CDK3Q00526 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.59□□□□□ -0.07
CDK3Q00526 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDK3Q00526 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDK3Q00526 FGD5P1-202ENST00000614866 2498 ntBASIC14.58□□□□□ -0.07
CDK3Q00526 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.07
CDK3Q00526 AC126755.1-201ENST00000525846 6405 ntBASIC14.58□□□□□ -0.07
CDK3Q00526 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.58□□□□□ -0.07
CDK3Q00526 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.58□□□□□ -0.07
CDK3Q00526 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDK3Q00526 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.58□□□□□ -0.07
CDK3Q00526 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CDK3Q00526 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK3Q00526 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK3Q00526 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK3Q00526 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CDK3Q00526 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.58□□□□□ -0.08
CDK3Q00526 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK3Q00526 AL133338.1-201ENST00000565695 1517 ntBASIC14.58□□□□□ -0.08
CDK3Q00526 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.58□□□□□ -0.08
CDK3Q00526 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK3Q00526 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK3Q00526 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK3Q00526 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.58□□□□□ -0.08
CDK3Q00526 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDK3Q00526 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CDK3Q00526 DPM3-202ENST00000368399 517 ntBASIC14.58□□□□□ -0.08
CDK3Q00526 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDK3Q00526 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms