Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
AP3S2P59780 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
AP3S2P59780 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP3S2P59780 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP3S2P59780 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP3S2P59780 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.85□□□□□ -0.35
AP3S2P59780 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
AP3S2P59780 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
AP3S2P59780 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.85□□□□□ -0.35
AP3S2P59780 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
AP3S2P59780 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.85□□□□□ -0.35
AP3S2P59780 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.85□□□□□ -0.35
AP3S2P59780 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP3S2P59780 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
AP3S2P59780 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP3S2P59780 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.85□□□□□ -0.35
AP3S2P59780 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
AP3S2P59780 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.85□□□□□ -0.35
AP3S2P59780 AL360270.3-201ENST00000609118 1348 ntBASIC12.85□□□□□ -0.35
AP3S2P59780 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
AP3S2P59780 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
AP3S2P59780 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP3S2P59780 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
AP3S2P59780 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
AP3S2P59780 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S2P59780 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S2P59780 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.84□□□□□ -0.35
AP3S2P59780 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S2P59780 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
AP3S2P59780 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S2P59780 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
AP3S2P59780 AC012617.1-204ENST00000586340 2305 ntBASIC12.84□□□□□ -0.35
AP3S2P59780 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S2P59780 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S2P59780 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S2P59780 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S2P59780 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
AP3S2P59780 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
AP3S2P59780 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S2P59780 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.84□□□□□ -0.35
AP3S2P59780 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.84□□□□□ -0.35
AP3S2P59780 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S2P59780 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S2P59780 AC011840.2-201ENST00000563063 1520 ntBASIC12.84□□□□□ -0.35
AP3S2P59780 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S2P59780 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
AP3S2P59780 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.84□□□□□ -0.35
AP3S2P59780 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S2P59780 TARDBPP1-201ENST00000442013 1203 ntBASIC12.84□□□□□ -0.35
AP3S2P59780 AC018712.1-201ENST00000455767 687 ntBASIC12.84□□□□□ -0.35
AP3S2P59780 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S2P59780 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.84□□□□□ -0.35
AP3S2P59780 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S2P59780 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
AP3S2P59780 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S2P59780 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S2P59780 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
AP3S2P59780 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
AP3S2P59780 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S2P59780 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
AP3S2P59780 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
AP3S2P59780 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.84□□□□□ -0.35
AP3S2P59780 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S2P59780 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
AP3S2P59780 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
AP3S2P59780 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S2P59780 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.84□□□□□ -0.35
AP3S2P59780 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S2P59780 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S2P59780 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.84□□□□□ -0.35
AP3S2P59780 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S2P59780 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S2P59780 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S2P59780 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
AP3S2P59780 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
AP3S2P59780 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
AP3S2P59780 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
AP3S2P59780 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
AP3S2P59780 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.83□□□□□ -0.35
AP3S2P59780 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.83□□□□□ -0.36
AP3S2P59780 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 AC111170.3-201ENST00000624282 2464 ntBASIC12.83□□□□□ -0.36
AP3S2P59780 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
AP3S2P59780 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.83□□□□□ -0.36
AP3S2P59780 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.83□□□□□ -0.36
AP3S2P59780 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
AP3S2P59780 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
AP3S2P59780 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
AP3S2P59780 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S2P59780 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.83□□□□□ -0.36
AP3S2P59780 AC083964.2-201ENST00000623988 2396 ntBASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms