Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN12P56749 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN12P56749 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN12P56749 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN12P56749 KRT8P24-201ENST00000560290 1559 ntBASIC13.03□□□□□ -0.32
CLDN12P56749 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN12P56749 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.03□□□□□ -0.32
CLDN12P56749 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CLDN12P56749 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN12P56749 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN12P56749 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN12P56749 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CLDN12P56749 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN12P56749 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN12P56749 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN12P56749 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.03□□□□□ -0.32
CLDN12P56749 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.03□□□□□ -0.32
CLDN12P56749 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.03□□□□□ -0.32
CLDN12P56749 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CLDN12P56749 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.03□□□□□ -0.32
CLDN12P56749 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.03□□□□□ -0.32
CLDN12P56749 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.03□□□□□ -0.32
CLDN12P56749 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN12P56749 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.03□□□□□ -0.32
CLDN12P56749 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.03□□□□□ -0.32
CLDN12P56749 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.03□□□□□ -0.32
CLDN12P56749 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.03□□□□□ -0.32
CLDN12P56749 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN12P56749 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.03□□□□□ -0.32
CLDN12P56749 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN12P56749 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.03□□□□□ -0.32
CLDN12P56749 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CLDN12P56749 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN12P56749 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN12P56749 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN12P56749 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN12P56749 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN12P56749 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CLDN12P56749 ELL2P1-201ENST00000413990 1906 ntBASIC13.03□□□□□ -0.32
CLDN12P56749 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
CLDN12P56749 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.03□□□□□ -0.32
CLDN12P56749 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN12P56749 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CLDN12P56749 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN12P56749 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN12P56749 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN12P56749 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN12P56749 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.03□□□□□ -0.32
CLDN12P56749 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN12P56749 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN12P56749 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN12P56749 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN12P56749 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.03□□□□□ -0.32
CLDN12P56749 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLDN12P56749 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CLDN12P56749 AC019294.4-201ENST00000561777 2905 ntBASIC13.02□□□□□ -0.32
CLDN12P56749 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.02□□□□□ -0.32
CLDN12P56749 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
CLDN12P56749 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLDN12P56749 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLDN12P56749 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
CLDN12P56749 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLDN12P56749 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLDN12P56749 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
CLDN12P56749 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CLDN12P56749 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.02□□□□□ -0.32
CLDN12P56749 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.02□□□□□ -0.32
CLDN12P56749 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.02□□□□□ -0.32
CLDN12P56749 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.02□□□□□ -0.33
CLDN12P56749 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN12P56749 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN12P56749 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN12P56749 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN12P56749 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN12P56749 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN12P56749 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN12P56749 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.02□□□□□ -0.33
CLDN12P56749 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.02□□□□□ -0.33
CLDN12P56749 AC004461.1-201ENST00000412461 403 ntBASIC13.02□□□□□ -0.33
CLDN12P56749 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.02□□□□□ -0.33
CLDN12P56749 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.02□□□□□ -0.33
CLDN12P56749 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.02□□□□□ -0.33
CLDN12P56749 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.02□□□□□ -0.33
CLDN12P56749 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.02□□□□□ -0.33
CLDN12P56749 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.02□□□□□ -0.33
CLDN12P56749 AC004066.1-201ENST00000502488 802 ntBASIC13.02□□□□□ -0.33
CLDN12P56749 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.02□□□□□ -0.33
CLDN12P56749 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.02□□□□□ -0.33
CLDN12P56749 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CLDN12P56749 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN12P56749 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
CLDN12P56749 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.02□□□□□ -0.33
CLDN12P56749 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.02□□□□□ -0.33
CLDN12P56749 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.02□□□□□ -0.33
CLDN12P56749 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN12P56749 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.02□□□□□ -0.33
CLDN12P56749 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN12P56749 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN12P56749 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN12P56749 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms