Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC10.92□□□□□ -0.66
APOC4P55056 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC10.92□□□□□ -0.66
APOC4P55056 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC10.92□□□□□ -0.66
APOC4P55056 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC10.92□□□□□ -0.66
APOC4P55056 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC10.92□□□□□ -0.66
APOC4P55056 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC10.92□□□□□ -0.66
APOC4P55056 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC10.92□□□□□ -0.66
APOC4P55056 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC10.92□□□□□ -0.66
APOC4P55056 REXO1L2P-201ENST00000425429 2069 ntBASIC10.92□□□□□ -0.66
APOC4P55056 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC10.92□□□□□ -0.66
APOC4P55056 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC10.92□□□□□ -0.66
APOC4P55056 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
APOC4P55056 SHC1P1-201ENST00000425230 1745 ntBASIC10.92□□□□□ -0.66
APOC4P55056 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC10.92□□□□□ -0.66
APOC4P55056 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC10.92□□□□□ -0.66
APOC4P55056 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC10.92□□□□□ -0.66
APOC4P55056 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
APOC4P55056 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC10.91□□□□□ -0.66
APOC4P55056 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC10.91□□□□□ -0.66
APOC4P55056 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 AL031595.1-201ENST00000623969 4709 ntBASIC10.91□□□□□ -0.66
APOC4P55056 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC10.91□□□□□ -0.66
APOC4P55056 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
APOC4P55056 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
APOC4P55056 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
APOC4P55056 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC10.91□□□□□ -0.66
APOC4P55056 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC10.91□□□□□ -0.66
APOC4P55056 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
APOC4P55056 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC10.91□□□□□ -0.66
APOC4P55056 AC022494.1-201ENST00000466044 728 ntBASIC10.91□□□□□ -0.66
APOC4P55056 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC10.91□□□□□ -0.66
APOC4P55056 AC100850.1-201ENST00000506768 649 ntBASIC10.91□□□□□ -0.66
APOC4P55056 ALG3P1-201ENST00000508806 1114 ntBASIC10.91□□□□□ -0.66
APOC4P55056 AC005740.2-201ENST00000511085 419 ntBASIC10.91□□□□□ -0.66
APOC4P55056 SCARNA20.5-201ENST00000516991 142 ntBASIC10.91□□□□□ -0.66
APOC4P55056 CD74-212ENST00000524315 584 ntTSL 5 BASIC10.91□□□□□ -0.66
APOC4P55056 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
APOC4P55056 AP003171.2-201ENST00000528208 925 ntBASIC10.91□□□□□ -0.66
APOC4P55056 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC10.91□□□□□ -0.66
APOC4P55056 RNF41-210ENST00000552244 716 ntTSL 3 BASIC10.91□□□□□ -0.66
APOC4P55056 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC10.91□□□□□ -0.66
APOC4P55056 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
APOC4P55056 VPS18-202ENST00000558474 873 ntTSL 3 BASIC10.91□□□□□ -0.66
APOC4P55056 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC10.91□□□□□ -0.66
APOC4P55056 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
APOC4P55056 MIR4683-201ENST00000579659 81 ntBASIC10.91□□□□□ -0.66
APOC4P55056 NKG7-204ENST00000595217 816 ntTSL 2 BASIC10.91□□□□□ -0.66
APOC4P55056 GPR182-203ENST00000622922 591 ntBASIC10.91□□□□□ -0.66
APOC4P55056 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC10.91□□□□□ -0.66
APOC4P55056 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
APOC4P55056 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
APOC4P55056 AC003102.2-201ENST00000589195 1469 ntBASIC10.91□□□□□ -0.66
APOC4P55056 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
APOC4P55056 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
APOC4P55056 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
APOC4P55056 AC138035.3-201ENST00000622706 2791 ntBASIC10.91□□□□□ -0.66
APOC4P55056 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms