Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.68□□□□□ -0.06
GTF2A1P52655 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
GTF2A1P52655 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
GTF2A1P52655 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GTF2A1P52655 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
GTF2A1P52655 AC024075.2-201ENST00000598112 1473 ntBASIC14.68□□□□□ -0.06
GTF2A1P52655 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
GTF2A1P52655 BX537318.2-201ENST00000624893 4162 ntBASIC14.68□□□□□ -0.06
GTF2A1P52655 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GTF2A1P52655 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GTF2A1P52655 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GTF2A1P52655 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GTF2A1P52655 FBXW11-201ENST00000265094 4342 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GTF2A1P52655 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC14.67□□□□□ -0.06
GTF2A1P52655 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC14.67□□□□□ -0.06
GTF2A1P52655 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
GTF2A1P52655 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GTF2A1P52655 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GTF2A1P52655 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GTF2A1P52655 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GTF2A1P52655 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC14.67□□□□□ -0.06
GTF2A1P52655 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GTF2A1P52655 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GTF2A1P52655 CIC-204ENST00000572681 8218 ntTSL 5 BASIC14.67□□□□□ -0.06
GTF2A1P52655 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
GTF2A1P52655 RRBP1-203ENST00000377807 3792 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
GTF2A1P52655 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GTF2A1P52655 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
GTF2A1P52655 RAP1A-202ENST00000369709 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GTF2A1P52655 AC125807.2-201ENST00000513358 3514 ntBASIC14.67□□□□□ -0.06
GTF2A1P52655 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GTF2A1P52655 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GTF2A1P52655 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.67□□□□□ -0.06
GTF2A1P52655 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.67□□□□□ -0.06
GTF2A1P52655 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GTF2A1P52655 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GTF2A1P52655 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.67□□□□□ -0.06
GTF2A1P52655 BX005266.1-201ENST00000473402 457 ntBASIC14.67□□□□□ -0.06
GTF2A1P52655 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.67□□□□□ -0.06
GTF2A1P52655 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.67□□□□□ -0.06
GTF2A1P52655 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.67□□□□□ -0.06
GTF2A1P52655 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GTF2A1P52655 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GTF2A1P52655 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
GTF2A1P52655 AL021155.1-201ENST00000438808 2637 ntBASIC14.67□□□□□ -0.06
GTF2A1P52655 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
GTF2A1P52655 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
GTF2A1P52655 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GTF2A1P52655 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GTF2A1P52655 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
GTF2A1P52655 LRFN3-204ENST00000588831 3689 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
GTF2A1P52655 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
GTF2A1P52655 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GTF2A1P52655 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
GTF2A1P52655 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GTF2A1P52655 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GTF2A1P52655 AL645608.3-201ENST00000448179 3043 ntTSL 2 BASIC14.66□□□□□ -0.06
GTF2A1P52655 LIMCH1-213ENST00000511496 3439 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GTF2A1P52655 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
GTF2A1P52655 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
GTF2A1P52655 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
GTF2A1P52655 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
GTF2A1P52655 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
GTF2A1P52655 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GTF2A1P52655 POM121L3P-201ENST00000419331 1163 ntBASIC14.66□□□□□ -0.06
GTF2A1P52655 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
GTF2A1P52655 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.66□□□□□ -0.06
GTF2A1P52655 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.66□□□□□ -0.06
GTF2A1P52655 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.66□□□□□ -0.06
GTF2A1P52655 LINC01023-201ENST00000606054 436 ntBASIC14.66□□□□□ -0.06
GTF2A1P52655 AL121956.5-201ENST00000625261 221 ntBASIC14.66□□□□□ -0.06
GTF2A1P52655 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GTF2A1P52655 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GTF2A1P52655 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
GTF2A1P52655 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GTF2A1P52655 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC14.66□□□□□ -0.06
GTF2A1P52655 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GTF2A1P52655 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GTF2A1P52655 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
GTF2A1P52655 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GTF2A1P52655 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
GTF2A1P52655 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GTF2A1P52655 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
GTF2A1P52655 LPP-AS2-201ENST00000605573 2852 ntBASIC14.66□□□□□ -0.06
GTF2A1P52655 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GTF2A1P52655 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
GTF2A1P52655 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
GTF2A1P52655 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GTF2A1P52655 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GTF2A1P52655 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GTF2A1P52655 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
GTF2A1P52655 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC14.65□□□□□ -0.06
GTF2A1P52655 PSAP-201ENST00000394934 2830 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
GTF2A1P52655 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC14.65□□□□□ -0.06
GTF2A1P52655 DDO-201ENST00000368923 1953 ntTSL 2 BASIC14.65□□□□□ -0.06
GTF2A1P52655 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
GTF2A1P52655 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GTF2A1P52655 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GTF2A1P52655 HNRNPMP1-201ENST00000560685 1768 ntBASIC14.65□□□□□ -0.06
GTF2A1P52655 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms