Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC093004.1-201ENST00000508850 424 ntBASIC13.33□□□□□ -0.28
SRP9P49458 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.33□□□□□ -0.28
SRP9P49458 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SRP9P49458 TPRX2P-201ENST00000535362 881 ntBASIC13.33□□□□□ -0.28
SRP9P49458 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SRP9P49458 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
SRP9P49458 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.33□□□□□ -0.28
SRP9P49458 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.33□□□□□ -0.28
SRP9P49458 AF228730.6-201ENST00000641497 218 ntBASIC13.33□□□□□ -0.28
SRP9P49458 AC084121.3-201ENST00000641716 218 ntBASIC13.33□□□□□ -0.28
SRP9P49458 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.33□□□□□ -0.28
SRP9P49458 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SRP9P49458 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SRP9P49458 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SRP9P49458 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SRP9P49458 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SRP9P49458 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SRP9P49458 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SRP9P49458 AC018442.1-201ENST00000421439 2061 ntBASIC13.33□□□□□ -0.28
SRP9P49458 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SRP9P49458 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.33□□□□□ -0.28
SRP9P49458 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SRP9P49458 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SRP9P49458 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SRP9P49458 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.33□□□□□ -0.28
SRP9P49458 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SRP9P49458 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SRP9P49458 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SRP9P49458 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
SRP9P49458 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SRP9P49458 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRP9P49458 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.32□□□□□ -0.28
SRP9P49458 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRP9P49458 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRP9P49458 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SRP9P49458 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRP9P49458 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.32□□□□□ -0.28
SRP9P49458 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRP9P49458 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.32□□□□□ -0.28
SRP9P49458 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRP9P49458 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.32□□□□□ -0.28
SRP9P49458 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRP9P49458 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.32□□□□□ -0.28
SRP9P49458 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.32□□□□□ -0.28
SRP9P49458 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
SRP9P49458 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.32□□□□□ -0.28
SRP9P49458 AC015802.1-201ENST00000588104 1449 ntBASIC13.32□□□□□ -0.28
SRP9P49458 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.32□□□□□ -0.28
SRP9P49458 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRP9P49458 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRP9P49458 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRP9P49458 SPDYE19P-201ENST00000338590 713 ntBASIC13.32□□□□□ -0.28
SRP9P49458 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRP9P49458 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRP9P49458 AL133267.1-201ENST00000398220 340 ntBASIC13.32□□□□□ -0.28
SRP9P49458 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRP9P49458 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.32□□□□□ -0.28
SRP9P49458 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.32□□□□□ -0.28
SRP9P49458 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRP9P49458 KRT18P43-201ENST00000469825 1281 ntBASIC13.32□□□□□ -0.28
SRP9P49458 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRP9P49458 TERF1P3-201ENST00000505638 1227 ntBASIC13.32□□□□□ -0.28
SRP9P49458 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.32□□□□□ -0.28
SRP9P49458 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.32□□□□□ -0.28
SRP9P49458 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SRP9P49458 LINC02560-201ENST00000596379 459 ntBASIC13.32□□□□□ -0.28
SRP9P49458 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRP9P49458 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.32□□□□□ -0.28
SRP9P49458 AC008761.3-201ENST00000624803 892 ntBASIC13.32□□□□□ -0.28
SRP9P49458 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRP9P49458 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SRP9P49458 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.32□□□□□ -0.28
SRP9P49458 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRP9P49458 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.32□□□□□ -0.28
SRP9P49458 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRP9P49458 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SRP9P49458 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRP9P49458 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SRP9P49458 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRP9P49458 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SRP9P49458 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SRP9P49458 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRP9P49458 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SRP9P49458 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SRP9P49458 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SRP9P49458 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRP9P49458 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRP9P49458 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SRP9P49458 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.31□□□□□ -0.28
SRP9P49458 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.31□□□□□ -0.28
SRP9P49458 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SRP9P49458 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SRP9P49458 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.31□□□□□ -0.28
SRP9P49458 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
SRP9P49458 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SRP9P49458 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SRP9P49458 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRP9P49458 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SRP9P49458 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SRP9P49458 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms