Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.17□□□□□ -0.3
CX3CR1P49238 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.17□□□□□ -0.3
CX3CR1P49238 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.17□□□□□ -0.3
CX3CR1P49238 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.17□□□□□ -0.3
CX3CR1P49238 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CR1P49238 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CR1P49238 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CR1P49238 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.17□□□□□ -0.3
CX3CR1P49238 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CR1P49238 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.17□□□□□ -0.3
CX3CR1P49238 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.17□□□□□ -0.3
CX3CR1P49238 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CR1P49238 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CR1P49238 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.17□□□□□ -0.3
CX3CR1P49238 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
CX3CR1P49238 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CR1P49238 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.17□□□□□ -0.3
CX3CR1P49238 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
CX3CR1P49238 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CR1P49238 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.17□□□□□ -0.3
CX3CR1P49238 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CR1P49238 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CX3CR1P49238 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CR1P49238 AC005252.3-201ENST00000623855 2258 ntBASIC13.16□□□□□ -0.3
CX3CR1P49238 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CX3CR1P49238 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CX3CR1P49238 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CR1P49238 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CR1P49238 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CX3CR1P49238 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CR1P49238 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CR1P49238 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CR1P49238 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CR1P49238 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CX3CR1P49238 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.16□□□□□ -0.3
CX3CR1P49238 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CR1P49238 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CR1P49238 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CR1P49238 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CX3CR1P49238 AC117489.1-201ENST00000625169 3217 ntBASIC13.16□□□□□ -0.3
CX3CR1P49238 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CR1P49238 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CR1P49238 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CR1P49238 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CR1P49238 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CR1P49238 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.16□□□□□ -0.3
CX3CR1P49238 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.16□□□□□ -0.3
CX3CR1P49238 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CR1P49238 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.16□□□□□ -0.3
CX3CR1P49238 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.16□□□□□ -0.3
CX3CR1P49238 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.16□□□□□ -0.3
CX3CR1P49238 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.16□□□□□ -0.3
CX3CR1P49238 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.16□□□□□ -0.3
CX3CR1P49238 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.16□□□□□ -0.3
CX3CR1P49238 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CR1P49238 AC022616.1-201ENST00000518688 554 ntBASIC13.16□□□□□ -0.3
CX3CR1P49238 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.16□□□□□ -0.3
CX3CR1P49238 AC092552.1-201ENST00000547243 906 ntBASIC13.16□□□□□ -0.3
CX3CR1P49238 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.16□□□□□ -0.3
CX3CR1P49238 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.16□□□□□ -0.3
CX3CR1P49238 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.16□□□□□ -0.3
CX3CR1P49238 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.16□□□□□ -0.3
CX3CR1P49238 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.16□□□□□ -0.3
CX3CR1P49238 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.16□□□□□ -0.3
CX3CR1P49238 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.16□□□□□ -0.3
CX3CR1P49238 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.16□□□□□ -0.3
CX3CR1P49238 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CX3CR1P49238 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CR1P49238 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.16□□□□□ -0.3
CX3CR1P49238 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CR1P49238 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CR1P49238 AL391825.1-201ENST00000457671 1364 ntBASIC13.16□□□□□ -0.3
CX3CR1P49238 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CR1P49238 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.16□□□□□ -0.3
CX3CR1P49238 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CX3CR1P49238 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CR1P49238 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.16□□□□□ -0.3
CX3CR1P49238 AC007541.1-201ENST00000570282 1469 ntBASIC13.16□□□□□ -0.3
CX3CR1P49238 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CX3CR1P49238 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.16□□□□□ -0.3
CX3CR1P49238 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.16□□□□□ -0.3
CX3CR1P49238 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CX3CR1P49238 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CR1P49238 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CX3CR1P49238 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CR1P49238 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CR1P49238 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.15□□□□□ -0.3
CX3CR1P49238 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CX3CR1P49238 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CR1P49238 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CR1P49238 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.15□□□□□ -0.3
CX3CR1P49238 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.15□□□□□ -0.3
CX3CR1P49238 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CR1P49238 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CR1P49238 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CR1P49238 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.15□□□□□ -0.3
CX3CR1P49238 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CX3CR1P49238 AC055811.4-201ENST00000624039 1754 ntBASIC13.15□□□□□ -0.3
CX3CR1P49238 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.15□□□□□ -0.3
CX3CR1P49238 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms