Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
NCAPD3P42695 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
NCAPD3P42695 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
NCAPD3P42695 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
NCAPD3P42695 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
NCAPD3P42695 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
NCAPD3P42695 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
NCAPD3P42695 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC25.28■■□□□ 1.64
NCAPD3P42695 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NCAPD3P42695 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC25.28■■□□□ 1.64
NCAPD3P42695 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC25.28■■□□□ 1.64
NCAPD3P42695 AP003680.1-201ENST00000598970 3660 ntBASIC25.28■■□□□ 1.64
NCAPD3P42695 PCDHA1-201ENST00000378133 2726 ntBASIC25.28■■□□□ 1.64
NCAPD3P42695 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC25.28■■□□□ 1.64
NCAPD3P42695 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NCAPD3P42695 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NCAPD3P42695 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NCAPD3P42695 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC25.28■■□□□ 1.64
NCAPD3P42695 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
NCAPD3P42695 AL137244.1-201ENST00000422931 865 ntBASIC25.28■■□□□ 1.64
NCAPD3P42695 AC100858.1-201ENST00000514059 1228 ntBASIC25.28■■□□□ 1.64
NCAPD3P42695 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC25.28■■□□□ 1.64
NCAPD3P42695 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
NCAPD3P42695 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC25.28■■□□□ 1.64
NCAPD3P42695 ACY3-202ENST00000529256 933 ntTSL 3 BASIC25.28■■□□□ 1.64
NCAPD3P42695 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC25.28■■□□□ 1.64
NCAPD3P42695 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC25.28■■□□□ 1.64
NCAPD3P42695 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
NCAPD3P42695 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NCAPD3P42695 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
NCAPD3P42695 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
NCAPD3P42695 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC25.27■■□□□ 1.64
NCAPD3P42695 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
NCAPD3P42695 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
NCAPD3P42695 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
NCAPD3P42695 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC25.27■■□□□ 1.64
NCAPD3P42695 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
NCAPD3P42695 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC25.27■■□□□ 1.64
NCAPD3P42695 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
NCAPD3P42695 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
NCAPD3P42695 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
NCAPD3P42695 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
NCAPD3P42695 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
NCAPD3P42695 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC25.27■■□□□ 1.64
NCAPD3P42695 RPSAP12-201ENST00000435879 888 ntBASIC25.27■■□□□ 1.64
NCAPD3P42695 SLC25A15P3-201ENST00000505530 290 ntBASIC25.27■■□□□ 1.64
NCAPD3P42695 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC25.27■■□□□ 1.64
NCAPD3P42695 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
NCAPD3P42695 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC25.27■■□□□ 1.64
NCAPD3P42695 AL359219.1-201ENST00000556311 934 ntBASIC25.27■■□□□ 1.64
NCAPD3P42695 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC25.27■■□□□ 1.64
NCAPD3P42695 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
NCAPD3P42695 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
NCAPD3P42695 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
NCAPD3P42695 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC25.26■■□□□ 1.64
NCAPD3P42695 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC25.26■■□□□ 1.64
NCAPD3P42695 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
NCAPD3P42695 SHMT1P1-201ENST00000419974 1312 ntBASIC25.26■■□□□ 1.63
NCAPD3P42695 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
NCAPD3P42695 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
NCAPD3P42695 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
NCAPD3P42695 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC25.26■■□□□ 1.63
NCAPD3P42695 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC25.26■■□□□ 1.63
NCAPD3P42695 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
NCAPD3P42695 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC25.26■■□□□ 1.63
NCAPD3P42695 AC147876.1-201ENST00000504408 322 ntBASIC25.26■■□□□ 1.63
NCAPD3P42695 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC25.26■■□□□ 1.63
NCAPD3P42695 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
NCAPD3P42695 AP003040.1-201ENST00000532044 1024 ntBASIC25.26■■□□□ 1.63
NCAPD3P42695 KRT8P34-201ENST00000577607 1044 ntBASIC25.26■■□□□ 1.63
NCAPD3P42695 AC245369.7-201ENST00000631386 350 ntBASIC25.26■■□□□ 1.63
NCAPD3P42695 AC015688.4-201ENST00000580780 1647 ntBASIC25.26■■□□□ 1.63
NCAPD3P42695 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
NCAPD3P42695 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
NCAPD3P42695 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
NCAPD3P42695 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
NCAPD3P42695 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
NCAPD3P42695 GOLGA8UP-201ENST00000527159 1755 ntBASIC25.25■■□□□ 1.63
NCAPD3P42695 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC25.25■■□□□ 1.63
NCAPD3P42695 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC25.25■■□□□ 1.63
NCAPD3P42695 GGTLC4P-201ENST00000402176 664 ntBASIC25.25■■□□□ 1.63
NCAPD3P42695 AC053503.3-201ENST00000448375 114 ntBASIC25.25■■□□□ 1.63
NCAPD3P42695 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC25.25■■□□□ 1.63
NCAPD3P42695 AC091304.3-201ENST00000566500 716 ntBASIC25.25■■□□□ 1.63
NCAPD3P42695 INO80E-209ENST00000567254 625 ntTSL 2 BASIC25.25■■□□□ 1.63
NCAPD3P42695 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC25.25■■□□□ 1.63
NCAPD3P42695 AC005746.3-201ENST00000614751 393 ntBASIC25.25■■□□□ 1.63
NCAPD3P42695 MIR6125-201ENST00000618986 96 ntBASIC25.25■■□□□ 1.63
NCAPD3P42695 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC25.25■■□□□ 1.63
NCAPD3P42695 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
NCAPD3P42695 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
NCAPD3P42695 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
NCAPD3P42695 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
NCAPD3P42695 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC25.25■■□□□ 1.63
NCAPD3P42695 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
NCAPD3P42695 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
NCAPD3P42695 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
NCAPD3P42695 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
NCAPD3P42695 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC25.24■■□□□ 1.63
NCAPD3P42695 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms