Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
APOBEC1P41238 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOBEC1P41238 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOBEC1P41238 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOBEC1P41238 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.49□□□□□ -0.25
APOBEC1P41238 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOBEC1P41238 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOBEC1P41238 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOBEC1P41238 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOBEC1P41238 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOBEC1P41238 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOBEC1P41238 RPL7P3-201ENST00000441388 714 ntBASIC13.49□□□□□ -0.25
APOBEC1P41238 AL590640.2-201ENST00000457038 527 ntBASIC13.49□□□□□ -0.25
APOBEC1P41238 TPT1P11-201ENST00000458482 498 ntBASIC13.49□□□□□ -0.25
APOBEC1P41238 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
APOBEC1P41238 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.49□□□□□ -0.25
APOBEC1P41238 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.49□□□□□ -0.25
APOBEC1P41238 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.49□□□□□ -0.25
APOBEC1P41238 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
APOBEC1P41238 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOBEC1P41238 AC078819.1-201ENST00000547454 765 ntBASIC13.49□□□□□ -0.25
APOBEC1P41238 AC012085.1-201ENST00000548270 765 ntBASIC13.49□□□□□ -0.25
APOBEC1P41238 AC079316.1-201ENST00000548397 411 ntBASIC13.49□□□□□ -0.25
APOBEC1P41238 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.49□□□□□ -0.25
APOBEC1P41238 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.49□□□□□ -0.25
APOBEC1P41238 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.49□□□□□ -0.25
APOBEC1P41238 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOBEC1P41238 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
APOBEC1P41238 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOBEC1P41238 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOBEC1P41238 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOBEC1P41238 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.49□□□□□ -0.25
APOBEC1P41238 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOBEC1P41238 LINC00552-201ENST00000625151 2579 ntBASIC13.49□□□□□ -0.25
APOBEC1P41238 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOBEC1P41238 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOBEC1P41238 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
APOBEC1P41238 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.49□□□□□ -0.25
APOBEC1P41238 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOBEC1P41238 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.49□□□□□ -0.25
APOBEC1P41238 AL354702.1-201ENST00000442006 1960 ntBASIC13.49□□□□□ -0.25
APOBEC1P41238 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.49□□□□□ -0.25
APOBEC1P41238 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
APOBEC1P41238 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
APOBEC1P41238 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.48□□□□□ -0.25
APOBEC1P41238 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOBEC1P41238 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOBEC1P41238 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.48□□□□□ -0.25
APOBEC1P41238 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
APOBEC1P41238 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOBEC1P41238 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.48□□□□□ -0.25
APOBEC1P41238 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
APOBEC1P41238 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
APOBEC1P41238 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOBEC1P41238 RN7SKP175-201ENST00000408472 289 ntBASIC13.48□□□□□ -0.25
APOBEC1P41238 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.48□□□□□ -0.25
APOBEC1P41238 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
APOBEC1P41238 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
APOBEC1P41238 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.48□□□□□ -0.25
APOBEC1P41238 AL391280.1-201ENST00000506969 1062 ntBASIC13.48□□□□□ -0.25
APOBEC1P41238 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.48□□□□□ -0.25
APOBEC1P41238 RAB43P1-201ENST00000561790 589 ntBASIC13.48□□□□□ -0.25
APOBEC1P41238 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.48□□□□□ -0.25
APOBEC1P41238 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
APOBEC1P41238 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.48□□□□□ -0.25
APOBEC1P41238 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.48□□□□□ -0.25
APOBEC1P41238 OR10B1P-201ENST00000601666 907 ntBASIC13.48□□□□□ -0.25
APOBEC1P41238 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.48□□□□□ -0.25
APOBEC1P41238 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.48□□□□□ -0.25
APOBEC1P41238 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOBEC1P41238 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
APOBEC1P41238 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOBEC1P41238 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.48□□□□□ -0.25
APOBEC1P41238 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
APOBEC1P41238 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOBEC1P41238 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
APOBEC1P41238 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.48□□□□□ -0.25
APOBEC1P41238 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.48□□□□□ -0.25
APOBEC1P41238 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.48□□□□□ -0.25
APOBEC1P41238 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.48□□□□□ -0.25
APOBEC1P41238 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
APOBEC1P41238 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOBEC1P41238 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
APOBEC1P41238 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
APOBEC1P41238 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.48□□□□□ -0.25
APOBEC1P41238 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.47□□□□□ -0.25
APOBEC1P41238 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
APOBEC1P41238 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 AHCYP2-201ENST00000430630 1300 ntBASIC13.47□□□□□ -0.25
APOBEC1P41238 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.47□□□□□ -0.25
APOBEC1P41238 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
APOBEC1P41238 AC020910.5-201ENST00000623668 1865 ntBASIC13.47□□□□□ -0.25
APOBEC1P41238 INE2-201ENST00000630399 1874 ntBASIC13.47□□□□□ -0.25
APOBEC1P41238 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms