Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDKN1AP38936 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDKN1AP38936 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.76□□□□□ -0.37
CDKN1AP38936 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDKN1AP38936 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDKN1AP38936 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDKN1AP38936 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.76□□□□□ -0.37
CDKN1AP38936 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.76□□□□□ -0.37
CDKN1AP38936 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CDKN1AP38936 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDKN1AP38936 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.76□□□□□ -0.37
CDKN1AP38936 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDKN1AP38936 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDKN1AP38936 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CDKN1AP38936 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC12.76□□□□□ -0.37
CDKN1AP38936 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDKN1AP38936 IMP3P2-201ENST00000489760 475 ntBASIC12.76□□□□□ -0.37
CDKN1AP38936 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDKN1AP38936 AC106794.1-201ENST00000506935 792 ntBASIC12.76□□□□□ -0.37
CDKN1AP38936 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CDKN1AP38936 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDKN1AP38936 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC12.76□□□□□ -0.37
CDKN1AP38936 RN7SL190P-201ENST00000582519 257 ntBASIC12.76□□□□□ -0.37
CDKN1AP38936 AC097724.1-201ENST00000609581 426 ntBASIC12.76□□□□□ -0.37
CDKN1AP38936 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
CDKN1AP38936 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDKN1AP38936 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDKN1AP38936 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.76□□□□□ -0.37
CDKN1AP38936 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDKN1AP38936 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDKN1AP38936 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CDKN1AP38936 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDKN1AP38936 AL365209.1-201ENST00000624418 6473 ntBASIC12.76□□□□□ -0.37
CDKN1AP38936 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDKN1AP38936 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CDKN1AP38936 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.76□□□□□ -0.37
CDKN1AP38936 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDKN1AP38936 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDKN1AP38936 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDKN1AP38936 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CDKN1AP38936 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CDKN1AP38936 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.76□□□□□ -0.37
CDKN1AP38936 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CDKN1AP38936 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDKN1AP38936 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CDKN1AP38936 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
CDKN1AP38936 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDKN1AP38936 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.76□□□□□ -0.37
CDKN1AP38936 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.76□□□□□ -0.37
CDKN1AP38936 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.75□□□□□ -0.37
CDKN1AP38936 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CDKN1AP38936 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CDKN1AP38936 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDKN1AP38936 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CDKN1AP38936 MIR600HG-201ENST00000449175 5984 ntBASIC12.75□□□□□ -0.37
CDKN1AP38936 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDKN1AP38936 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDKN1AP38936 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDKN1AP38936 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDKN1AP38936 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDKN1AP38936 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDKN1AP38936 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDKN1AP38936 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDKN1AP38936 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDKN1AP38936 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.75□□□□□ -0.37
CDKN1AP38936 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDKN1AP38936 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDKN1AP38936 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CDKN1AP38936 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDKN1AP38936 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.75□□□□□ -0.37
CDKN1AP38936 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDKN1AP38936 AC104457.1-201ENST00000401024 814 ntBASIC12.75□□□□□ -0.37
CDKN1AP38936 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC12.75□□□□□ -0.37
CDKN1AP38936 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CDKN1AP38936 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDKN1AP38936 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDKN1AP38936 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CDKN1AP38936 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC12.75□□□□□ -0.37
CDKN1AP38936 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC12.75□□□□□ -0.37
CDKN1AP38936 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.75□□□□□ -0.37
CDKN1AP38936 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC12.75□□□□□ -0.37
CDKN1AP38936 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.75□□□□□ -0.37
CDKN1AP38936 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.75□□□□□ -0.37
CDKN1AP38936 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDKN1AP38936 CHMP4BP1-201ENST00000556017 588 ntBASIC12.75□□□□□ -0.37
CDKN1AP38936 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDKN1AP38936 COG4-212ENST00000564653 590 ntTSL 5 BASIC12.75□□□□□ -0.37
CDKN1AP38936 MIR3619-201ENST00000579667 83 ntBASIC12.75□□□□□ -0.37
CDKN1AP38936 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CDKN1AP38936 REXO1L4P-201ENST00000605109 1937 ntBASIC12.75□□□□□ -0.37
CDKN1AP38936 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.75□□□□□ -0.37
CDKN1AP38936 AL023803.2-201ENST00000620080 638 ntBASIC12.75□□□□□ -0.37
CDKN1AP38936 AC091812.3-201ENST00000621362 345 ntBASIC12.75□□□□□ -0.37
CDKN1AP38936 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.75□□□□□ -0.37
CDKN1AP38936 INE2-201ENST00000630399 1874 ntBASIC12.75□□□□□ -0.37
CDKN1AP38936 AC002472.3-201ENST00000640124 621 ntBASIC12.75□□□□□ -0.37
CDKN1AP38936 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDKN1AP38936 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDKN1AP38936 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDKN1AP38936 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms