Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
CPS1P31327 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CPS1P31327 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPS1P31327 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPS1P31327 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CPS1P31327 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPS1P31327 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPS1P31327 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
CPS1P31327 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPS1P31327 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPS1P31327 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPS1P31327 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC20.4■□□□□ 0.86
CPS1P31327 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC20.4■□□□□ 0.86
CPS1P31327 FAM197Y6-201ENST00000420524 766 ntBASIC20.4■□□□□ 0.86
CPS1P31327 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPS1P31327 AC124068.2-201ENST00000569473 1109 ntBASIC20.4■□□□□ 0.86
CPS1P31327 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC20.4■□□□□ 0.86
CPS1P31327 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC20.4■□□□□ 0.86
CPS1P31327 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPS1P31327 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC20.4■□□□□ 0.86
CPS1P31327 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
CPS1P31327 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPS1P31327 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPS1P31327 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPS1P31327 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC20.4■□□□□ 0.86
CPS1P31327 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CPS1P31327 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC20.4■□□□□ 0.86
CPS1P31327 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC20.4■□□□□ 0.86
CPS1P31327 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CPS1P31327 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPS1P31327 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPS1P31327 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
CPS1P31327 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CPS1P31327 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
CPS1P31327 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC20.39■□□□□ 0.86
CPS1P31327 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC20.39■□□□□ 0.86
CPS1P31327 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
CPS1P31327 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC20.39■□□□□ 0.85
CPS1P31327 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CPS1P31327 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CPS1P31327 MAGEA7P-201ENST00000436482 942 ntBASIC20.39■□□□□ 0.85
CPS1P31327 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC20.39■□□□□ 0.85
CPS1P31327 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPS1P31327 RN7SL767P-201ENST00000493013 295 ntBASIC20.39■□□□□ 0.85
CPS1P31327 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC20.39■□□□□ 0.85
CPS1P31327 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC20.39■□□□□ 0.85
CPS1P31327 HNRNPA1P16-201ENST00000575692 955 ntBASIC20.39■□□□□ 0.85
CPS1P31327 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC20.39■□□□□ 0.85
CPS1P31327 HCG18-241ENST00000602290 821 ntTSL 2 BASIC20.39■□□□□ 0.85
CPS1P31327 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC20.39■□□□□ 0.85
CPS1P31327 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CPS1P31327 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPS1P31327 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPS1P31327 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CPS1P31327 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CPS1P31327 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPS1P31327 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPS1P31327 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC20.39■□□□□ 0.85
CPS1P31327 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPS1P31327 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC20.39■□□□□ 0.85
CPS1P31327 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
CPS1P31327 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPS1P31327 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC20.39■□□□□ 0.85
CPS1P31327 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CPS1P31327 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CPS1P31327 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CPS1P31327 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPS1P31327 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CPS1P31327 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPS1P31327 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPS1P31327 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC20.38■□□□□ 0.85
CPS1P31327 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPS1P31327 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPS1P31327 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC20.38■□□□□ 0.85
CPS1P31327 RHOQP2-201ENST00000449922 579 ntBASIC20.38■□□□□ 0.85
CPS1P31327 AC108724.1-201ENST00000481669 352 ntBASIC20.38■□□□□ 0.85
CPS1P31327 HINT1-205ENST00000508488 703 ntTSL 2 BASIC20.38■□□□□ 0.85
CPS1P31327 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CPS1P31327 AC078814.4-201ENST00000546650 327 ntBASIC20.38■□□□□ 0.85
CPS1P31327 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC20.38■□□□□ 0.85
CPS1P31327 KRT8P2-201ENST00000556193 944 ntBASIC20.38■□□□□ 0.85
CPS1P31327 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CPS1P31327 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC20.38■□□□□ 0.85
CPS1P31327 FKBP4P8-201ENST00000610931 1369 ntBASIC20.38■□□□□ 0.85
CPS1P31327 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPS1P31327 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CPS1P31327 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CPS1P31327 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPS1P31327 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CPS1P31327 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPS1P31327 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC20.38■□□□□ 0.85
CPS1P31327 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPS1P31327 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPS1P31327 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPS1P31327 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CPS1P31327 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPS1P31327 AL157823.1-201ENST00000403727 628 ntBASIC20.37■□□□□ 0.85
CPS1P31327 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC20.37■□□□□ 0.85
CPS1P31327 SEPHS2P1-201ENST00000511618 1162 ntBASIC20.37■□□□□ 0.85
CPS1P31327 KRT18P37-201ENST00000520711 1282 ntBASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms