Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMLP26374 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.9■□□□□ 0.46
CHMLP26374 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMLP26374 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMLP26374 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMLP26374 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.9■□□□□ 0.46
CHMLP26374 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.9■□□□□ 0.46
CHMLP26374 AC016397.2-201ENST00000624848 1985 ntBASIC17.9■□□□□ 0.46
CHMLP26374 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
CHMLP26374 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC17.9■□□□□ 0.46
CHMLP26374 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMLP26374 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMLP26374 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.9■□□□□ 0.46
CHMLP26374 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CHMLP26374 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMLP26374 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMLP26374 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMLP26374 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CHMLP26374 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.9■□□□□ 0.46
CHMLP26374 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMLP26374 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.9■□□□□ 0.46
CHMLP26374 CD8B2-202ENST00000417670 633 ntBASIC17.9■□□□□ 0.46
CHMLP26374 FAM8A4P-201ENST00000435433 1213 ntBASIC17.9■□□□□ 0.46
CHMLP26374 PUDPP3-201ENST00000445368 636 ntBASIC17.9■□□□□ 0.46
CHMLP26374 AC007551.1-201ENST00000457394 519 ntBASIC17.9■□□□□ 0.46
CHMLP26374 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.9■□□□□ 0.46
CHMLP26374 KRT90P-201ENST00000549264 1064 ntBASIC17.9■□□□□ 0.46
CHMLP26374 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMLP26374 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.9■□□□□ 0.46
CHMLP26374 MIR4683-201ENST00000579659 81 ntBASIC17.9■□□□□ 0.46
CHMLP26374 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMLP26374 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.9■□□□□ 0.46
CHMLP26374 AC006453.4-201ENST00000636949 1252 ntBASIC17.9■□□□□ 0.46
CHMLP26374 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
CHMLP26374 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.9■□□□□ 0.46
CHMLP26374 AC041040.2-201ENST00000622926 2899 ntBASIC17.9■□□□□ 0.46
CHMLP26374 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMLP26374 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMLP26374 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMLP26374 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMLP26374 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.9■□□□□ 0.46
CHMLP26374 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CHMLP26374 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMLP26374 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMLP26374 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMLP26374 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMLP26374 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CHMLP26374 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CHMLP26374 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMLP26374 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMLP26374 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMLP26374 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMLP26374 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMLP26374 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMLP26374 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMLP26374 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMLP26374 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.89■□□□□ 0.45
CHMLP26374 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMLP26374 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.89■□□□□ 0.45
CHMLP26374 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMLP26374 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.89■□□□□ 0.45
CHMLP26374 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.89■□□□□ 0.45
CHMLP26374 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.89■□□□□ 0.45
CHMLP26374 MIR6074-201ENST00000612054 107 ntBASIC17.89■□□□□ 0.45
CHMLP26374 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMLP26374 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.89■□□□□ 0.45
CHMLP26374 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMLP26374 AC105233.6-201ENST00000642093 218 ntBASIC17.89■□□□□ 0.45
CHMLP26374 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMLP26374 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMLP26374 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CHMLP26374 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMLP26374 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC17.89■□□□□ 0.45
CHMLP26374 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMLP26374 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMLP26374 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.89■□□□□ 0.45
CHMLP26374 CICP16-201ENST00000502609 2813 ntBASIC17.89■□□□□ 0.45
CHMLP26374 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMLP26374 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CHMLP26374 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMLP26374 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMLP26374 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CHMLP26374 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CHMLP26374 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMLP26374 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMLP26374 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC17.88■□□□□ 0.45
CHMLP26374 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.88■□□□□ 0.45
CHMLP26374 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMLP26374 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMLP26374 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMLP26374 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.88■□□□□ 0.45
CHMLP26374 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CHMLP26374 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHMLP26374 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHMLP26374 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMLP26374 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.88■□□□□ 0.45
CHMLP26374 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHMLP26374 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.88■□□□□ 0.45
CHMLP26374 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CHMLP26374 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms