Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.18□□□□□ -0.14
MMP11P24347 AC243960.2-201ENST00000600996 747 ntBASIC14.18□□□□□ -0.14
MMP11P24347 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.18□□□□□ -0.14
MMP11P24347 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP11P24347 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP11P24347 AC055811.4-201ENST00000624039 1754 ntBASIC14.18□□□□□ -0.14
MMP11P24347 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.18□□□□□ -0.14
MMP11P24347 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP11P24347 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
MMP11P24347 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MMP11P24347 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP11P24347 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
MMP11P24347 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP11P24347 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP11P24347 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
MMP11P24347 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP11P24347 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP11P24347 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.18□□□□□ -0.14
MMP11P24347 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP11P24347 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
MMP11P24347 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP11P24347 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP11P24347 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
MMP11P24347 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP11P24347 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP11P24347 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
MMP11P24347 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.17□□□□□ -0.14
MMP11P24347 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP11P24347 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.17□□□□□ -0.14
MMP11P24347 MYO15B-237ENST00000642007 4893 ntBASIC14.17□□□□□ -0.14
MMP11P24347 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP11P24347 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP11P24347 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP11P24347 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP11P24347 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP11P24347 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
MMP11P24347 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP11P24347 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
MMP11P24347 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP11P24347 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP11P24347 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.17□□□□□ -0.14
MMP11P24347 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP11P24347 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.17□□□□□ -0.14
MMP11P24347 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP11P24347 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.17□□□□□ -0.14
MMP11P24347 AC006033.1-201ENST00000440505 426 ntBASIC14.17□□□□□ -0.14
MMP11P24347 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP11P24347 AL591846.1-201ENST00000451736 433 ntBASIC14.17□□□□□ -0.14
MMP11P24347 COX5BP1-201ENST00000507622 393 ntBASIC14.17□□□□□ -0.14
MMP11P24347 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.17□□□□□ -0.14
MMP11P24347 DUX4L47-201ENST00000566374 394 ntBASIC14.17□□□□□ -0.14
MMP11P24347 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.17□□□□□ -0.14
MMP11P24347 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.17□□□□□ -0.14
MMP11P24347 AC103810.3-201ENST00000583567 96 ntBASIC14.17□□□□□ -0.14
MMP11P24347 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP11P24347 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.17□□□□□ -0.14
MMP11P24347 AL022328.3-201ENST00000607943 679 ntBASIC14.17□□□□□ -0.14
MMP11P24347 AC244093.1-201ENST00000610837 814 ntBASIC14.17□□□□□ -0.14
MMP11P24347 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP11P24347 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.17□□□□□ -0.14
MMP11P24347 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.17□□□□□ -0.14
MMP11P24347 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP11P24347 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.17□□□□□ -0.14
MMP11P24347 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP11P24347 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP11P24347 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP11P24347 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP11P24347 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP11P24347 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.17□□□□□ -0.14
MMP11P24347 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP11P24347 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
MMP11P24347 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP11P24347 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.17□□□□□ -0.14
MMP11P24347 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.17□□□□□ -0.14
MMP11P24347 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP11P24347 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
MMP11P24347 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.16□□□□□ -0.14
MMP11P24347 AL360270.3-201ENST00000609118 1348 ntBASIC14.16□□□□□ -0.14
MMP11P24347 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.16□□□□□ -0.14
MMP11P24347 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP11P24347 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MMP11P24347 AL133338.1-201ENST00000565695 1517 ntBASIC14.16□□□□□ -0.14
MMP11P24347 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.16□□□□□ -0.14
MMP11P24347 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP11P24347 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP11P24347 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP11P24347 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP11P24347 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
MMP11P24347 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP11P24347 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP11P24347 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MMP11P24347 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP11P24347 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MMP11P24347 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP11P24347 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
MMP11P24347 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP11P24347 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
MMP11P24347 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MMP11P24347 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MMP11P24347 AC007969.1-201ENST00000433675 447 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms