Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 AC023794.5-201ENST00000564380 2157 ntBASIC13.13□□□□□ -0.31
RAB3BP20337 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.13□□□□□ -0.31
RAB3BP20337 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.13□□□□□ -0.31
RAB3BP20337 AC073548.1-201ENST00000624088 1882 ntBASIC13.13□□□□□ -0.31
RAB3BP20337 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 TOMM22P5-201ENST00000416399 439 ntBASIC13.13□□□□□ -0.31
RAB3BP20337 AL591424.1-201ENST00000442569 1213 ntBASIC13.13□□□□□ -0.31
RAB3BP20337 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.13□□□□□ -0.31
RAB3BP20337 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.13□□□□□ -0.31
RAB3BP20337 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.13□□□□□ -0.31
RAB3BP20337 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.13□□□□□ -0.31
RAB3BP20337 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.13□□□□□ -0.31
RAB3BP20337 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.13□□□□□ -0.31
RAB3BP20337 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.13□□□□□ -0.31
RAB3BP20337 AC025048.3-201ENST00000590609 569 ntBASIC13.13□□□□□ -0.31
RAB3BP20337 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.13□□□□□ -0.31
RAB3BP20337 AC005702.4-201ENST00000618393 416 ntBASIC13.13□□□□□ -0.31
RAB3BP20337 LINC00628-201ENST00000628516 1289 ntBASIC13.13□□□□□ -0.31
RAB3BP20337 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.13□□□□□ -0.31
RAB3BP20337 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
RAB3BP20337 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
RAB3BP20337 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
RAB3BP20337 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
RAB3BP20337 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.13□□□□□ -0.31
RAB3BP20337 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.13□□□□□ -0.31
RAB3BP20337 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
RAB3BP20337 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB3BP20337 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB3BP20337 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB3BP20337 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB3BP20337 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAB3BP20337 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAB3BP20337 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
RAB3BP20337 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.12□□□□□ -0.31
RAB3BP20337 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.12□□□□□ -0.31
RAB3BP20337 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB3BP20337 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
RAB3BP20337 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB3BP20337 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAB3BP20337 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAB3BP20337 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB3BP20337 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.12□□□□□ -0.31
RAB3BP20337 CICP16-201ENST00000502609 2813 ntBASIC13.12□□□□□ -0.31
RAB3BP20337 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAB3BP20337 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
RAB3BP20337 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB3BP20337 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.12□□□□□ -0.31
RAB3BP20337 MIR1224-201ENST00000408193 85 ntBASIC13.12□□□□□ -0.31
RAB3BP20337 RPL13P2-201ENST00000440687 659 ntBASIC13.12□□□□□ -0.31
RAB3BP20337 ACTG1P14-201ENST00000446382 1122 ntBASIC13.12□□□□□ -0.31
RAB3BP20337 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.12□□□□□ -0.31
RAB3BP20337 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB3BP20337 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
RAB3BP20337 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.12□□□□□ -0.31
RAB3BP20337 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.12□□□□□ -0.31
RAB3BP20337 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.12□□□□□ -0.31
RAB3BP20337 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.12□□□□□ -0.31
RAB3BP20337 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAB3BP20337 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.12□□□□□ -0.31
RAB3BP20337 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.12□□□□□ -0.31
RAB3BP20337 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
RAB3BP20337 AC007967.4-201ENST00000614700 386 ntBASIC13.12□□□□□ -0.31
RAB3BP20337 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
RAB3BP20337 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAB3BP20337 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB3BP20337 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.12□□□□□ -0.31
RAB3BP20337 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAB3BP20337 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAB3BP20337 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.12□□□□□ -0.31
RAB3BP20337 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB3BP20337 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB3BP20337 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
RAB3BP20337 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB3BP20337 AL137783.1-201ENST00000623494 1896 ntBASIC13.12□□□□□ -0.31
RAB3BP20337 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
RAB3BP20337 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAB3BP20337 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.12□□□□□ -0.31
RAB3BP20337 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
RAB3BP20337 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.12□□□□□ -0.31
RAB3BP20337 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.12□□□□□ -0.31
RAB3BP20337 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB3BP20337 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB3BP20337 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms