Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCK1P16333 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCK1P16333 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NCK1P16333 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.15□□□□□ -0.14
NCK1P16333 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.15□□□□□ -0.14
NCK1P16333 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCK1P16333 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCK1P16333 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.15□□□□□ -0.14
NCK1P16333 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCK1P16333 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCK1P16333 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NCK1P16333 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCK1P16333 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NCK1P16333 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
NCK1P16333 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
NCK1P16333 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.14□□□□□ -0.15
NCK1P16333 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NCK1P16333 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NCK1P16333 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NCK1P16333 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NCK1P16333 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.14□□□□□ -0.15
NCK1P16333 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NCK1P16333 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NCK1P16333 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NCK1P16333 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.14□□□□□ -0.15
NCK1P16333 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NCK1P16333 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.14□□□□□ -0.15
NCK1P16333 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
NCK1P16333 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NCK1P16333 AC027612.1-201ENST00000445234 2395 ntBASIC14.14□□□□□ -0.15
NCK1P16333 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NCK1P16333 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
NCK1P16333 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.14□□□□□ -0.15
NCK1P16333 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
NCK1P16333 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NCK1P16333 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.14□□□□□ -0.15
NCK1P16333 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NCK1P16333 RN7SL618P-201ENST00000477850 296 ntBASIC14.14□□□□□ -0.15
NCK1P16333 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
NCK1P16333 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.14□□□□□ -0.15
NCK1P16333 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
NCK1P16333 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
NCK1P16333 AL121894.2-201ENST00000602977 491 ntBASIC14.14□□□□□ -0.15
NCK1P16333 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NCK1P16333 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.14□□□□□ -0.15
NCK1P16333 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NCK1P16333 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NCK1P16333 AL158070.2-201ENST00000623713 1621 ntBASIC14.14□□□□□ -0.15
NCK1P16333 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.14□□□□□ -0.15
NCK1P16333 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NCK1P16333 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NCK1P16333 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.14□□□□□ -0.15
NCK1P16333 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.14□□□□□ -0.15
NCK1P16333 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
NCK1P16333 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NCK1P16333 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.14□□□□□ -0.15
NCK1P16333 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NCK1P16333 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NCK1P16333 FAM90A12P-201ENST00000519497 2375 ntBASIC14.14□□□□□ -0.15
NCK1P16333 FAM90A24P-201ENST00000520792 2369 ntBASIC14.14□□□□□ -0.15
NCK1P16333 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NCK1P16333 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
NCK1P16333 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NCK1P16333 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NCK1P16333 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
NCK1P16333 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NCK1P16333 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
NCK1P16333 AC020910.6-201ENST00000623084 1459 ntBASIC14.13□□□□□ -0.15
NCK1P16333 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.13□□□□□ -0.15
NCK1P16333 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NCK1P16333 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
NCK1P16333 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.13□□□□□ -0.15
NCK1P16333 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NCK1P16333 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NCK1P16333 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NCK1P16333 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.13□□□□□ -0.15
NCK1P16333 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
NCK1P16333 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NCK1P16333 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NCK1P16333 SPDYE7P-202ENST00000420373 878 ntBASIC14.13□□□□□ -0.15
NCK1P16333 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NCK1P16333 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.13□□□□□ -0.15
NCK1P16333 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.13□□□□□ -0.15
NCK1P16333 KRT18P58-201ENST00000527480 1120 ntBASIC14.13□□□□□ -0.15
NCK1P16333 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.13□□□□□ -0.15
NCK1P16333 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.13□□□□□ -0.15
NCK1P16333 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
NCK1P16333 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.13□□□□□ -0.15
NCK1P16333 AC004835.2-201ENST00000603762 682 ntBASIC14.13□□□□□ -0.15
NCK1P16333 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.13□□□□□ -0.15
NCK1P16333 TEX28P1-201ENST00000613479 1221 ntBASIC14.13□□□□□ -0.15
NCK1P16333 TEX28P2-201ENST00000617764 1221 ntBASIC14.13□□□□□ -0.15
NCK1P16333 SPDYE12P-201ENST00000618416 771 ntBASIC14.13□□□□□ -0.15
NCK1P16333 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.13□□□□□ -0.15
NCK1P16333 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.13□□□□□ -0.15
NCK1P16333 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.13□□□□□ -0.15
NCK1P16333 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.13□□□□□ -0.15
NCK1P16333 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NCK1P16333 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NCK1P16333 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms