Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL6A2P12110 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.77□□□□□ -0.05
COL6A2P12110 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.77□□□□□ -0.05
COL6A2P12110 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.77□□□□□ -0.05
COL6A2P12110 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.77□□□□□ -0.05
COL6A2P12110 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.77□□□□□ -0.05
COL6A2P12110 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL6A2P12110 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.77□□□□□ -0.05
COL6A2P12110 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL6A2P12110 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.77□□□□□ -0.05
COL6A2P12110 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.77□□□□□ -0.05
COL6A2P12110 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL6A2P12110 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL6A2P12110 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COL6A2P12110 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL6A2P12110 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL6A2P12110 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL6A2P12110 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL6A2P12110 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL6A2P12110 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.77□□□□□ -0.05
COL6A2P12110 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
COL6A2P12110 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.77□□□□□ -0.05
COL6A2P12110 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL6A2P12110 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COL6A2P12110 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL6A2P12110 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COL6A2P12110 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
COL6A2P12110 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
COL6A2P12110 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
COL6A2P12110 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.76□□□□□ -0.05
COL6A2P12110 CICP17-201ENST00000418553 2377 ntBASIC14.76□□□□□ -0.05
COL6A2P12110 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
COL6A2P12110 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL6A2P12110 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.76□□□□□ -0.05
COL6A2P12110 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL6A2P12110 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL6A2P12110 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL6A2P12110 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.76□□□□□ -0.05
COL6A2P12110 RN7SL832P-201ENST00000607781 1756 ntBASIC14.76□□□□□ -0.05
COL6A2P12110 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
COL6A2P12110 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
COL6A2P12110 MRPL37P1-201ENST00000592451 1337 ntBASIC14.76□□□□□ -0.05
COL6A2P12110 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL6A2P12110 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL6A2P12110 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL6A2P12110 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.76□□□□□ -0.05
COL6A2P12110 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.76□□□□□ -0.05
COL6A2P12110 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL6A2P12110 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.76□□□□□ -0.05
COL6A2P12110 AP001582.1-201ENST00000525856 295 ntBASIC14.76□□□□□ -0.05
COL6A2P12110 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.76□□□□□ -0.05
COL6A2P12110 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.76□□□□□ -0.05
COL6A2P12110 AC124283.3-201ENST00000570869 594 ntBASIC14.76□□□□□ -0.05
COL6A2P12110 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.76□□□□□ -0.05
COL6A2P12110 AP005019.2-201ENST00000615104 511 ntBASIC14.76□□□□□ -0.05
COL6A2P12110 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
COL6A2P12110 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL6A2P12110 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL6A2P12110 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL6A2P12110 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.76□□□□□ -0.05
COL6A2P12110 AC007326.2-201ENST00000624224 7579 ntBASIC14.76□□□□□ -0.05
COL6A2P12110 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL6A2P12110 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
COL6A2P12110 KRT8P24-201ENST00000560290 1559 ntBASIC14.76□□□□□ -0.05
COL6A2P12110 MBLAC2-202ENST00000514906 1936 ntBASIC14.76□□□□□ -0.05
COL6A2P12110 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
COL6A2P12110 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.76□□□□□ -0.05
COL6A2P12110 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL6A2P12110 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
COL6A2P12110 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.76□□□□□ -0.05
COL6A2P12110 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.76□□□□□ -0.05
COL6A2P12110 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.75□□□□□ -0.05
COL6A2P12110 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
COL6A2P12110 AC118758.2-201ENST00000614242 2813 ntBASIC14.75□□□□□ -0.05
COL6A2P12110 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
COL6A2P12110 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 AL136172.1-201ENST00000598590 1394 ntBASIC14.75□□□□□ -0.05
COL6A2P12110 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
COL6A2P12110 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
COL6A2P12110 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
COL6A2P12110 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
COL6A2P12110 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.75□□□□□ -0.05
COL6A2P12110 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.75□□□□□ -0.05
COL6A2P12110 SOCS2P1-201ENST00000417727 557 ntBASIC14.75□□□□□ -0.05
COL6A2P12110 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.75□□□□□ -0.05
COL6A2P12110 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
COL6A2P12110 EIF3FP3-201ENST00000434851 1086 ntBASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms