Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC21.25■□□□□ 0.99
CHGAP10645 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHGAP10645 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHGAP10645 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
CHGAP10645 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC21.25■□□□□ 0.99
CHGAP10645 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHGAP10645 TPM1-223ENST00000560445 485 ntTSL 3 BASIC21.25■□□□□ 0.99
CHGAP10645 AL031713.1-201ENST00000564813 661 ntBASIC21.25■□□□□ 0.99
CHGAP10645 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC21.25■□□□□ 0.99
CHGAP10645 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC21.25■□□□□ 0.99
CHGAP10645 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHGAP10645 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHGAP10645 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC21.25■□□□□ 0.99
CHGAP10645 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CHGAP10645 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHGAP10645 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHGAP10645 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC21.25■□□□□ 0.99
CHGAP10645 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CHGAP10645 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CHGAP10645 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC21.24■□□□□ 0.99
CHGAP10645 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC21.24■□□□□ 0.99
CHGAP10645 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CHGAP10645 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CHGAP10645 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHGAP10645 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHGAP10645 SOD2-202ENST00000367054 815 ntTSL 2 BASIC21.24■□□□□ 0.99
CHGAP10645 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHGAP10645 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC21.24■□□□□ 0.99
CHGAP10645 TSPY25P-201ENST00000429463 745 ntBASIC21.24■□□□□ 0.99
CHGAP10645 XBP1P1-201ENST00000436573 652 ntBASIC21.24■□□□□ 0.99
CHGAP10645 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
CHGAP10645 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
CHGAP10645 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
CHGAP10645 RPL17P45-201ENST00000586289 509 ntBASIC21.24■□□□□ 0.99
CHGAP10645 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC21.24■□□□□ 0.99
CHGAP10645 SIGLEC18P-201ENST00000602271 909 ntBASIC21.24■□□□□ 0.99
CHGAP10645 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CHGAP10645 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC21.24■□□□□ 0.99
CHGAP10645 KRT18P9-201ENST00000604826 1300 ntBASIC21.24■□□□□ 0.99
CHGAP10645 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHGAP10645 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHGAP10645 API5-203ENST00000455725 2257 ntTSL 2 BASIC21.24■□□□□ 0.99
CHGAP10645 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC21.23■□□□□ 0.99
CHGAP10645 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
CHGAP10645 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHGAP10645 GSN-206ENST00000394353 2311 ntTSL 2 BASIC21.23■□□□□ 0.99
CHGAP10645 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC21.23■□□□□ 0.99
CHGAP10645 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHGAP10645 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC21.23■□□□□ 0.99
CHGAP10645 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHGAP10645 RNA5SP359-201ENST00000364838 113 ntBASIC21.23■□□□□ 0.99
CHGAP10645 Z69890.1-201ENST00000382990 339 ntBASIC21.23■□□□□ 0.99
CHGAP10645 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CHGAP10645 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CHGAP10645 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC21.23■□□□□ 0.99
CHGAP10645 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC21.23■□□□□ 0.99
CHGAP10645 AL807761.2-201ENST00000422849 729 ntBASIC21.23■□□□□ 0.99
CHGAP10645 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC21.23■□□□□ 0.99
CHGAP10645 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC21.23■□□□□ 0.99
CHGAP10645 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC21.23■□□□□ 0.99
CHGAP10645 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CHGAP10645 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC21.23■□□□□ 0.99
CHGAP10645 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC21.23■□□□□ 0.99
CHGAP10645 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CHGAP10645 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC21.23■□□□□ 0.99
CHGAP10645 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHGAP10645 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHGAP10645 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHGAP10645 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHGAP10645 CASK-202ENST00000378158 3848 ntTSL 5 BASIC21.23■□□□□ 0.99
CHGAP10645 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHGAP10645 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC21.23■□□□□ 0.99
CHGAP10645 WAC-202ENST00000347934 2839 ntTSL 5 BASIC21.23■□□□□ 0.99
CHGAP10645 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHGAP10645 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC21.22■□□□□ 0.99
CHGAP10645 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHGAP10645 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CHGAP10645 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC21.22■□□□□ 0.99
CHGAP10645 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHGAP10645 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHGAP10645 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHGAP10645 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHGAP10645 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHGAP10645 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHGAP10645 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC21.22■□□□□ 0.99
CHGAP10645 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHGAP10645 AC025271.4-201ENST00000621477 1726 ntBASIC21.22■□□□□ 0.99
CHGAP10645 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC21.22■□□□□ 0.99
CHGAP10645 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHGAP10645 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHGAP10645 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHGAP10645 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHGAP10645 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHGAP10645 BANF1P3-201ENST00000412556 261 ntBASIC21.22■□□□□ 0.99
CHGAP10645 CTBP2P4-201ENST00000513884 920 ntBASIC21.22■□□□□ 0.99
CHGAP10645 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHGAP10645 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC21.22■□□□□ 0.99
CHGAP10645 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC21.22■□□□□ 0.99
CHGAP10645 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC21.22■□□□□ 0.99
CHGAP10645 GMFG-209ENST00000600322 622 ntTSL 5 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms