Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBCP0CG48 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
UBCP0CG48 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBCP0CG48 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBCP0CG48 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBCP0CG48 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBCP0CG48 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.16□□□□□ -0.3
UBCP0CG48 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.16□□□□□ -0.3
UBCP0CG48 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.16□□□□□ -0.3
UBCP0CG48 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBCP0CG48 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.16□□□□□ -0.3
UBCP0CG48 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
UBCP0CG48 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBCP0CG48 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
UBCP0CG48 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBCP0CG48 DGCR9-201ENST00000609630 2415 ntBASIC13.15□□□□□ -0.3
UBCP0CG48 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.15□□□□□ -0.3
UBCP0CG48 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
UBCP0CG48 AL731571.1-201ENST00000617058 5428 ntBASIC13.15□□□□□ -0.3
UBCP0CG48 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
UBCP0CG48 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
UBCP0CG48 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
UBCP0CG48 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
UBCP0CG48 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 AL356585.2-201ENST00000625078 2396 ntBASIC13.15□□□□□ -0.3
UBCP0CG48 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
UBCP0CG48 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.15□□□□□ -0.3
UBCP0CG48 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
UBCP0CG48 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.15□□□□□ -0.3
UBCP0CG48 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.15□□□□□ -0.3
UBCP0CG48 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.15□□□□□ -0.3
UBCP0CG48 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.15□□□□□ -0.3
UBCP0CG48 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.15□□□□□ -0.3
UBCP0CG48 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.15□□□□□ -0.3
UBCP0CG48 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.15□□□□□ -0.3
UBCP0CG48 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.15□□□□□ -0.3
UBCP0CG48 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.15□□□□□ -0.3
UBCP0CG48 AC093813.1-201ENST00000605066 256 ntBASIC13.15□□□□□ -0.3
UBCP0CG48 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
UBCP0CG48 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.15□□□□□ -0.3
UBCP0CG48 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
UBCP0CG48 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.15□□□□□ -0.3
UBCP0CG48 AGGF1P1-201ENST00000509500 2073 ntBASIC13.15□□□□□ -0.3
UBCP0CG48 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.15□□□□□ -0.3
UBCP0CG48 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.15□□□□□ -0.3
UBCP0CG48 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.15□□□□□ -0.3
UBCP0CG48 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
UBCP0CG48 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.15□□□□□ -0.3
UBCP0CG48 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.15□□□□□ -0.3
UBCP0CG48 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
UBCP0CG48 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBCP0CG48 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.15□□□□□ -0.3
UBCP0CG48 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.15□□□□□ -0.3
UBCP0CG48 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
UBCP0CG48 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
UBCP0CG48 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
UBCP0CG48 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.15□□□□□ -0.31
UBCP0CG48 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
UBCP0CG48 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
UBCP0CG48 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBCP0CG48 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBCP0CG48 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.14□□□□□ -0.31
UBCP0CG48 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UBCP0CG48 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBCP0CG48 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBCP0CG48 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBCP0CG48 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.14□□□□□ -0.31
UBCP0CG48 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
UBCP0CG48 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBCP0CG48 CR383656.2-201ENST00000548656 2254 ntBASIC13.14□□□□□ -0.31
UBCP0CG48 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.14□□□□□ -0.31
UBCP0CG48 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBCP0CG48 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms