Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.94■□□□□ 0.46
APPP05067 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
APPP05067 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.94■□□□□ 0.46
APPP05067 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
APPP05067 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.94■□□□□ 0.46
APPP05067 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
APPP05067 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
APPP05067 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
APPP05067 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
APPP05067 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
APPP05067 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
APPP05067 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.94■□□□□ 0.46
APPP05067 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.94■□□□□ 0.46
APPP05067 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.94■□□□□ 0.46
APPP05067 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.94■□□□□ 0.46
APPP05067 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.94■□□□□ 0.46
APPP05067 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
APPP05067 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.94■□□□□ 0.46
APPP05067 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.94■□□□□ 0.46
APPP05067 AC106820.3-201ENST00000561653 397 ntBASIC17.94■□□□□ 0.46
APPP05067 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
APPP05067 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.94■□□□□ 0.46
APPP05067 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.94■□□□□ 0.46
APPP05067 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.94■□□□□ 0.46
APPP05067 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
APPP05067 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
APPP05067 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
APPP05067 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
APPP05067 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.94■□□□□ 0.46
APPP05067 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
APPP05067 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
APPP05067 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
APPP05067 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.94■□□□□ 0.46
APPP05067 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
APPP05067 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
APPP05067 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
APPP05067 SALL4P5-201ENST00000419001 1760 ntBASIC17.94■□□□□ 0.46
APPP05067 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.94■□□□□ 0.46
APPP05067 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
APPP05067 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
APPP05067 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
APPP05067 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
APPP05067 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
APPP05067 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APPP05067 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
APPP05067 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.93■□□□□ 0.46
APPP05067 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APPP05067 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APPP05067 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
APPP05067 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
APPP05067 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.93■□□□□ 0.46
APPP05067 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
APPP05067 AC007969.1-201ENST00000433675 447 ntBASIC17.93■□□□□ 0.46
APPP05067 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.93■□□□□ 0.46
APPP05067 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
APPP05067 MIR4741-201ENST00000579822 90 ntBASIC17.93■□□□□ 0.46
APPP05067 AC009542.2-202ENST00000619004 1067 ntBASIC17.93■□□□□ 0.46
APPP05067 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
APPP05067 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APPP05067 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.93■□□□□ 0.46
APPP05067 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.93■□□□□ 0.46
APPP05067 KRT8P4-201ENST00000509735 1454 ntBASIC17.93■□□□□ 0.46
APPP05067 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
APPP05067 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
APPP05067 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APPP05067 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APPP05067 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APPP05067 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APPP05067 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APPP05067 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
APPP05067 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APPP05067 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
APPP05067 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
APPP05067 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.92■□□□□ 0.46
APPP05067 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
APPP05067 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.92■□□□□ 0.46
APPP05067 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
APPP05067 AC007686.3-201ENST00000619017 3487 ntBASIC17.92■□□□□ 0.46
APPP05067 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
APPP05067 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
APPP05067 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
APPP05067 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
APPP05067 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
APPP05067 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
APPP05067 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
APPP05067 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
APPP05067 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
APPP05067 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
APPP05067 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
APPP05067 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
APPP05067 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
APPP05067 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
APPP05067 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.92■□□□□ 0.46
APPP05067 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.92■□□□□ 0.46
APPP05067 RNA5SP412-201ENST00000516234 123 ntBASIC17.92■□□□□ 0.46
APPP05067 AL583810.1-201ENST00000553344 1045 ntBASIC17.92■□□□□ 0.46
APPP05067 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
APPP05067 AP006547.1-201ENST00000563435 692 ntBASIC17.92■□□□□ 0.46
APPP05067 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.92■□□□□ 0.46
APPP05067 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms