Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC11.95□□□□□ -0.5
APOC3P02656 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
APOC3P02656 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
APOC3P02656 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC3P02656 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC11.95□□□□□ -0.5
APOC3P02656 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
APOC3P02656 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC3P02656 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC3P02656 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC3P02656 AP3S2-216ENST00000617003 1561 ntBASIC11.95□□□□□ -0.5
APOC3P02656 AMT-239ENST00000636865 1914 ntTSL 5 BASIC11.95□□□□□ -0.5
APOC3P02656 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC11.95□□□□□ -0.5
APOC3P02656 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC3P02656 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
APOC3P02656 PALLD-209ENST00000507735 4379 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
APOC3P02656 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC11.95□□□□□ -0.5
APOC3P02656 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC11.95□□□□□ -0.5
APOC3P02656 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
APOC3P02656 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC3P02656 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
APOC3P02656 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
APOC3P02656 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC11.94□□□□□ -0.5
APOC3P02656 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
APOC3P02656 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC3P02656 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
APOC3P02656 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
APOC3P02656 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
APOC3P02656 LRFN3-204ENST00000588831 3689 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
APOC3P02656 KIF25-AS1-202ENST00000456585 2795 ntTSL 2 BASIC11.94□□□□□ -0.5
APOC3P02656 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
APOC3P02656 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC11.94□□□□□ -0.5
APOC3P02656 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
APOC3P02656 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC11.94□□□□□ -0.5
APOC3P02656 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
APOC3P02656 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
APOC3P02656 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
APOC3P02656 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC11.94□□□□□ -0.5
APOC3P02656 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
APOC3P02656 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
APOC3P02656 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
APOC3P02656 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC11.94□□□□□ -0.5
APOC3P02656 AC069152.1-201ENST00000438030 544 ntBASIC11.94□□□□□ -0.5
APOC3P02656 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC11.94□□□□□ -0.5
APOC3P02656 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
APOC3P02656 GUSBP12-201ENST00000513727 720 ntBASIC11.94□□□□□ -0.5
APOC3P02656 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC11.94□□□□□ -0.5
APOC3P02656 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC11.94□□□□□ -0.5
APOC3P02656 C2orf69P3-201ENST00000565542 1120 ntBASIC11.94□□□□□ -0.5
APOC3P02656 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
APOC3P02656 CYB561-217ENST00000582997 877 ntTSL 5 BASIC11.94□□□□□ -0.5
APOC3P02656 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
APOC3P02656 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
APOC3P02656 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC3P02656 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
APOC3P02656 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
APOC3P02656 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC3P02656 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
APOC3P02656 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
APOC3P02656 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC3P02656 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC11.94□□□□□ -0.5
APOC3P02656 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC3P02656 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC11.94□□□□□ -0.5
APOC3P02656 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC11.94□□□□□ -0.5
APOC3P02656 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
APOC3P02656 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
APOC3P02656 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
APOC3P02656 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
APOC3P02656 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
APOC3P02656 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
APOC3P02656 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
APOC3P02656 TK1-203ENST00000588734 1681 ntTSL 2 BASIC11.94□□□□□ -0.5
APOC3P02656 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
APOC3P02656 AGGF1P10-201ENST00000635005 2191 ntBASIC11.94□□□□□ -0.5
APOC3P02656 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC11.94□□□□□ -0.5
APOC3P02656 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
APOC3P02656 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC3P02656 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC3P02656 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC3P02656 CHGB-201ENST00000378961 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC3P02656 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC11.93□□□□□ -0.5
APOC3P02656 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC3P02656 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC3P02656 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
APOC3P02656 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
APOC3P02656 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC3P02656 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC3P02656 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC3P02656 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC3P02656 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
APOC3P02656 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC11.93□□□□□ -0.5
APOC3P02656 MIR662-201ENST00000384847 95 ntBASIC11.93□□□□□ -0.5
APOC3P02656 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
APOC3P02656 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
APOC3P02656 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
APOC3P02656 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
APOC3P02656 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC11.93□□□□□ -0.5
APOC3P02656 AL023973.1-201ENST00000624619 620 ntBASIC11.93□□□□□ -0.5
APOC3P02656 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC11.93□□□□□ -0.5
APOC3P02656 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
APOC3P02656 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms