Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AC107373.2-201ENST00000607735 490 ntBASIC13.29□□□□□ -0.28
APOC1P02654 AC004840.1-201ENST00000636359 365 ntBASIC13.29□□□□□ -0.28
APOC1P02654 AL603764.1-201ENST00000636452 321 ntBASIC13.29□□□□□ -0.28
APOC1P02654 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.29□□□□□ -0.28
APOC1P02654 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
APOC1P02654 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
APOC1P02654 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
APOC1P02654 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.29□□□□□ -0.28
APOC1P02654 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
APOC1P02654 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.29□□□□□ -0.28
APOC1P02654 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.29□□□□□ -0.28
APOC1P02654 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
APOC1P02654 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.29□□□□□ -0.28
APOC1P02654 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.29□□□□□ -0.28
APOC1P02654 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.29□□□□□ -0.28
APOC1P02654 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.28□□□□□ -0.28
APOC1P02654 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
APOC1P02654 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
APOC1P02654 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
APOC1P02654 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.28□□□□□ -0.28
APOC1P02654 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.28□□□□□ -0.28
APOC1P02654 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.28□□□□□ -0.28
APOC1P02654 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
APOC1P02654 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
APOC1P02654 AC027612.1-201ENST00000445234 2395 ntBASIC13.28□□□□□ -0.28
APOC1P02654 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.28□□□□□ -0.28
APOC1P02654 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.28□□□□□ -0.28
APOC1P02654 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.28□□□□□ -0.28
APOC1P02654 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.28□□□□□ -0.28
APOC1P02654 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.28□□□□□ -0.28
APOC1P02654 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
APOC1P02654 AC093214.1-201ENST00000511688 1107 ntBASIC13.28□□□□□ -0.28
APOC1P02654 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.28□□□□□ -0.28
APOC1P02654 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.28□□□□□ -0.28
APOC1P02654 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 AC104794.3-201ENST00000566840 1248 ntBASIC13.28□□□□□ -0.28
APOC1P02654 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.28□□□□□ -0.28
APOC1P02654 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.28□□□□□ -0.28
APOC1P02654 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.28□□□□□ -0.28
APOC1P02654 AC099568.2-201ENST00000609194 695 ntBASIC13.28□□□□□ -0.28
APOC1P02654 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.28□□□□□ -0.28
APOC1P02654 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.28□□□□□ -0.28
APOC1P02654 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.28□□□□□ -0.28
APOC1P02654 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.28□□□□□ -0.28
APOC1P02654 BX539320.1-201ENST00000623759 877 ntBASIC13.28□□□□□ -0.28
APOC1P02654 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.28□□□□□ -0.28
APOC1P02654 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
APOC1P02654 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.28□□□□□ -0.28
APOC1P02654 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
APOC1P02654 AC018442.1-201ENST00000421439 2061 ntBASIC13.28□□□□□ -0.28
APOC1P02654 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.28□□□□□ -0.28
APOC1P02654 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC13.28□□□□□ -0.28
APOC1P02654 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
APOC1P02654 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.28□□□□□ -0.28
APOC1P02654 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
APOC1P02654 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms