Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.33□□□□□ -0.28
CNOT4O95628 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CNOT4O95628 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CNOT4O95628 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.33□□□□□ -0.28
CNOT4O95628 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CNOT4O95628 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CNOT4O95628 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.33□□□□□ -0.28
CNOT4O95628 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.33□□□□□ -0.28
CNOT4O95628 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CNOT4O95628 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CNOT4O95628 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.33□□□□□ -0.28
CNOT4O95628 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.33□□□□□ -0.28
CNOT4O95628 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CNOT4O95628 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CNOT4O95628 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CNOT4O95628 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CNOT4O95628 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.33□□□□□ -0.28
CNOT4O95628 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CNOT4O95628 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CNOT4O95628 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CNOT4O95628 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CNOT4O95628 FAM197Y7-201ENST00000432892 766 ntBASIC13.33□□□□□ -0.28
CNOT4O95628 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.33□□□□□ -0.28
CNOT4O95628 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CNOT4O95628 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.33□□□□□ -0.28
CNOT4O95628 AC108725.1-201ENST00000495472 409 ntBASIC13.33□□□□□ -0.28
CNOT4O95628 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
CNOT4O95628 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.33□□□□□ -0.28
CNOT4O95628 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.33□□□□□ -0.28
CNOT4O95628 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CNOT4O95628 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.33□□□□□ -0.28
CNOT4O95628 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CNOT4O95628 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.33□□□□□ -0.28
CNOT4O95628 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.33□□□□□ -0.28
CNOT4O95628 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CNOT4O95628 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CNOT4O95628 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CNOT4O95628 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.33□□□□□ -0.28
CNOT4O95628 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CNOT4O95628 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.33□□□□□ -0.28
CNOT4O95628 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.33□□□□□ -0.28
CNOT4O95628 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CNOT4O95628 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CNOT4O95628 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
CNOT4O95628 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.33□□□□□ -0.28
CNOT4O95628 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.33□□□□□ -0.28
CNOT4O95628 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CNOT4O95628 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CNOT4O95628 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.33□□□□□ -0.28
CNOT4O95628 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
CNOT4O95628 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CNOT4O95628 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CNOT4O95628 LILRP1-201ENST00000444199 1370 ntBASIC13.32□□□□□ -0.28
CNOT4O95628 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNOT4O95628 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNOT4O95628 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNOT4O95628 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.32□□□□□ -0.28
CNOT4O95628 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNOT4O95628 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
CNOT4O95628 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
CNOT4O95628 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNOT4O95628 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.32□□□□□ -0.28
CNOT4O95628 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNOT4O95628 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CNOT4O95628 AC104581.4-201ENST00000623126 3052 ntBASIC13.32□□□□□ -0.28
CNOT4O95628 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.32□□□□□ -0.28
CNOT4O95628 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNOT4O95628 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CNOT4O95628 REXO1L5P-201ENST00000622260 2098 ntBASIC13.32□□□□□ -0.28
CNOT4O95628 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNOT4O95628 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.32□□□□□ -0.28
CNOT4O95628 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
CNOT4O95628 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNOT4O95628 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNOT4O95628 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNOT4O95628 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNOT4O95628 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CNOT4O95628 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNOT4O95628 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CNOT4O95628 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.32□□□□□ -0.28
CNOT4O95628 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CNOT4O95628 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.32□□□□□ -0.28
CNOT4O95628 AC078819.1-201ENST00000547454 765 ntBASIC13.32□□□□□ -0.28
CNOT4O95628 AC012085.1-201ENST00000548270 765 ntBASIC13.32□□□□□ -0.28
CNOT4O95628 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
CNOT4O95628 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNOT4O95628 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNOT4O95628 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CNOT4O95628 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNOT4O95628 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNOT4O95628 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.32□□□□□ -0.28
CNOT4O95628 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.32□□□□□ -0.28
CNOT4O95628 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CNOT4O95628 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNOT4O95628 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
CNOT4O95628 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNOT4O95628 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.32□□□□□ -0.28
CNOT4O95628 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNOT4O95628 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.32□□□□□ -0.28
CNOT4O95628 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms