Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 AC073150.1-201ENST00000450406 1084 ntBASIC16.04■□□□□ 0.16
CSPG5O95196 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.04■□□□□ 0.16
CSPG5O95196 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG5O95196 AC125604.1-201ENST00000496255 707 ntBASIC16.04■□□□□ 0.16
CSPG5O95196 RCC2P8-201ENST00000502779 1035 ntBASIC16.04■□□□□ 0.16
CSPG5O95196 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.04■□□□□ 0.16
CSPG5O95196 AL162426.1-201ENST00000624141 743 ntBASIC16.04■□□□□ 0.16
CSPG5O95196 AC100757.4-201ENST00000626934 759 ntBASIC16.04■□□□□ 0.16
CSPG5O95196 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG5O95196 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG5O95196 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CSPG5O95196 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG5O95196 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG5O95196 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.04■□□□□ 0.16
CSPG5O95196 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG5O95196 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG5O95196 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG5O95196 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.04■□□□□ 0.16
CSPG5O95196 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG5O95196 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG5O95196 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG5O95196 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.03■□□□□ 0.16
CSPG5O95196 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
CSPG5O95196 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CSPG5O95196 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG5O95196 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG5O95196 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.03■□□□□ 0.16
CSPG5O95196 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG5O95196 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG5O95196 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG5O95196 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG5O95196 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
CSPG5O95196 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.03■□□□□ 0.16
CSPG5O95196 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CSPG5O95196 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.03■□□□□ 0.16
CSPG5O95196 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.03■□□□□ 0.16
CSPG5O95196 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG5O95196 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG5O95196 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CSPG5O95196 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG5O95196 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.03■□□□□ 0.16
CSPG5O95196 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG5O95196 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG5O95196 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG5O95196 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.03■□□□□ 0.16
CSPG5O95196 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.03■□□□□ 0.16
CSPG5O95196 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.03■□□□□ 0.16
CSPG5O95196 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.03■□□□□ 0.16
CSPG5O95196 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.03■□□□□ 0.16
CSPG5O95196 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.03■□□□□ 0.16
CSPG5O95196 AL160314.3-201ENST00000556041 767 ntBASIC16.03■□□□□ 0.16
CSPG5O95196 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG5O95196 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.03■□□□□ 0.16
CSPG5O95196 WDR7-208ENST00000589935 544 ntTSL 4 BASIC16.03■□□□□ 0.16
CSPG5O95196 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.03■□□□□ 0.16
CSPG5O95196 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG5O95196 AC073352.2-201ENST00000609385 439 ntBASIC16.03■□□□□ 0.16
CSPG5O95196 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG5O95196 AC068587.8-201ENST00000641239 219 ntBASIC16.03■□□□□ 0.16
CSPG5O95196 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.03■□□□□ 0.16
CSPG5O95196 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG5O95196 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG5O95196 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CSPG5O95196 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CSPG5O95196 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG5O95196 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG5O95196 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CSPG5O95196 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG5O95196 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG5O95196 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CSPG5O95196 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.03■□□□□ 0.16
CSPG5O95196 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.03■□□□□ 0.16
CSPG5O95196 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC16.03■□□□□ 0.16
CSPG5O95196 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
CSPG5O95196 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG5O95196 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG5O95196 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG5O95196 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSPG5O95196 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSPG5O95196 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CSPG5O95196 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSPG5O95196 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.02■□□□□ 0.16
CSPG5O95196 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSPG5O95196 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.02■□□□□ 0.16
CSPG5O95196 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
CSPG5O95196 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.02■□□□□ 0.16
CSPG5O95196 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.02■□□□□ 0.16
CSPG5O95196 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSPG5O95196 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CSPG5O95196 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSPG5O95196 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSPG5O95196 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.02■□□□□ 0.16
CSPG5O95196 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.02■□□□□ 0.16
CSPG5O95196 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CSPG5O95196 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CSPG5O95196 AL355334.1-201ENST00000417713 215 ntBASIC16.02■□□□□ 0.16
CSPG5O95196 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.02■□□□□ 0.16
CSPG5O95196 PDIA3P2-201ENST00000428073 158 ntBASIC16.02■□□□□ 0.16
CSPG5O95196 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.02■□□□□ 0.16
CSPG5O95196 AC104784.1-201ENST00000473096 294 ntBASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms