Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.22□□□□□ -0.13
DUX1O43812 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DUX1O43812 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
DUX1O43812 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
DUX1O43812 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.22□□□□□ -0.13
DUX1O43812 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DUX1O43812 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DUX1O43812 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DUX1O43812 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
DUX1O43812 AL136172.1-201ENST00000598590 1394 ntBASIC14.22□□□□□ -0.13
DUX1O43812 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
DUX1O43812 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
DUX1O43812 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DUX1O43812 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.21□□□□□ -0.13
DUX1O43812 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
DUX1O43812 MRPL37P1-201ENST00000592451 1337 ntBASIC14.21□□□□□ -0.13
DUX1O43812 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DUX1O43812 LINC01101-201ENST00000622953 1884 ntBASIC14.21□□□□□ -0.13
DUX1O43812 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.21□□□□□ -0.13
DUX1O43812 KRT8P19-201ENST00000551916 1455 ntBASIC14.21□□□□□ -0.13
DUX1O43812 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.21□□□□□ -0.13
DUX1O43812 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
DUX1O43812 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DUX1O43812 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
DUX1O43812 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DUX1O43812 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.21□□□□□ -0.13
DUX1O43812 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
DUX1O43812 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DUX1O43812 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.21□□□□□ -0.13
DUX1O43812 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
DUX1O43812 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.21□□□□□ -0.13
DUX1O43812 AL157407.1-201ENST00000435784 904 ntBASIC14.21□□□□□ -0.13
DUX1O43812 NUP210P1-202ENST00000504322 710 ntBASIC14.21□□□□□ -0.13
DUX1O43812 SCARNA21-201ENST00000517026 139 ntBASIC14.21□□□□□ -0.13
DUX1O43812 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.21□□□□□ -0.13
DUX1O43812 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.21□□□□□ -0.13
DUX1O43812 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.21□□□□□ -0.13
DUX1O43812 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
DUX1O43812 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.21□□□□□ -0.13
DUX1O43812 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.21□□□□□ -0.13
DUX1O43812 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
DUX1O43812 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DUX1O43812 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.21□□□□□ -0.13
DUX1O43812 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
DUX1O43812 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
DUX1O43812 ACE3P-201ENST00000423435 1973 ntBASIC14.21□□□□□ -0.13
DUX1O43812 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.21□□□□□ -0.13
DUX1O43812 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DUX1O43812 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.13
DUX1O43812 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
DUX1O43812 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
DUX1O43812 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.21□□□□□ -0.13
DUX1O43812 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
DUX1O43812 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
DUX1O43812 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
DUX1O43812 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
DUX1O43812 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.21□□□□□ -0.14
DUX1O43812 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
DUX1O43812 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
DUX1O43812 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
DUX1O43812 FAM90A7P-201ENST00000382628 1395 ntBASIC14.21□□□□□ -0.14
DUX1O43812 FAM90A23P-201ENST00000400136 1395 ntBASIC14.21□□□□□ -0.14
DUX1O43812 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.21□□□□□ -0.14
DUX1O43812 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DUX1O43812 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.2□□□□□ -0.14
DUX1O43812 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DUX1O43812 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DUX1O43812 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
DUX1O43812 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
DUX1O43812 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DUX1O43812 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.2□□□□□ -0.14
DUX1O43812 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DUX1O43812 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DUX1O43812 AC092135.3-201ENST00000624151 1846 ntBASIC14.2□□□□□ -0.14
DUX1O43812 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.2□□□□□ -0.14
DUX1O43812 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
DUX1O43812 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
DUX1O43812 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
DUX1O43812 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DUX1O43812 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.2□□□□□ -0.14
DUX1O43812 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DUX1O43812 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DUX1O43812 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.2□□□□□ -0.14
DUX1O43812 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DUX1O43812 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DUX1O43812 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
DUX1O43812 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DUX1O43812 FXNP2-201ENST00000411625 547 ntBASIC14.2□□□□□ -0.14
DUX1O43812 AC007274.2-201ENST00000421675 662 ntBASIC14.2□□□□□ -0.14
DUX1O43812 AC078875.1-201ENST00000431907 724 ntBASIC14.2□□□□□ -0.14
DUX1O43812 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DUX1O43812 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.2□□□□□ -0.14
DUX1O43812 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.2□□□□□ -0.14
DUX1O43812 RBM8B-201ENST00000555532 525 ntBASIC14.2□□□□□ -0.14
DUX1O43812 FGFR3P5-201ENST00000564496 886 ntBASIC14.2□□□□□ -0.14
DUX1O43812 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.2□□□□□ -0.14
DUX1O43812 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.2□□□□□ -0.14
DUX1O43812 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.2□□□□□ -0.14
DUX1O43812 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DUX1O43812 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms