Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 KIAA0319-202ENST00000430948 6620 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 TRPM1-201ENST00000256552 5514 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 SNX33P1-201ENST00000592116 1762 ntBASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 DRC7-203ENST00000394337 2906 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 TGOLN2-201ENST00000282120 6419 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHKB-CPT1BH3BT56 WASHC5-201ENST00000318410 4187 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CHKB-CPT1BH3BT56 SNRNP48-201ENST00000342415 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CHKB-CPT1BH3BT56 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.09
CHKB-CPT1BH3BT56 NTNG1-207ENST00000370073 3347 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
CHKB-CPT1BH3BT56 ZC2HC1C-203ENST00000524913 4283 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
CHKB-CPT1BH3BT56 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC8.21□□□□□ -1.09
CHKB-CPT1BH3BT56 MYO5A-202ENST00000358212 12220 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
CHKB-CPT1BH3BT56 RAPGEF3-202ENST00000395358 4092 ntTSL 2 BASIC8.21□□□□□ -1.09
CHKB-CPT1BH3BT56 MYO5A-206ENST00000399233 12220 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
CHKB-CPT1BH3BT56 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CHKB-CPT1BH3BT56 RHPN1-AS1-201ENST00000518049 1918 ntBASIC8.21□□□□□ -1.09
CHKB-CPT1BH3BT56 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CHKB-CPT1BH3BT56 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CHKB-CPT1BH3BT56 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC8.21□□□□□ -1.09
CHKB-CPT1BH3BT56 TRMT5-201ENST00000261249 5573 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CHKB-CPT1BH3BT56 PEX12-201ENST00000225873 2675 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CHKB-CPT1BH3BT56 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC8.21□□□□□ -1.09
CHKB-CPT1BH3BT56 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
CHKB-CPT1BH3BT56 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC8.21□□□□□ -1.09
CHKB-CPT1BH3BT56 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CHKB-CPT1BH3BT56 MCU-204ENST00000536019 3224 ntTSL 2 BASIC8.21□□□□□ -1.09
CHKB-CPT1BH3BT56 NFXL1-202ENST00000381538 3728 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
CHKB-CPT1BH3BT56 PCDHB15-201ENST00000231173 4017 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 MESTP1-201ENST00000404287 994 ntBASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 ACTG1P4-201ENST00000425123 1122 ntBASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 AF186192.3-201ENST00000583427 947 ntBASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 AC083880.1-201ENST00000608266 535 ntBASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 AP001350.2-201ENST00000625104 1094 ntBASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 ZNF469-201ENST00000437464 13203 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 PIEZO2-201ENST00000302079 9356 ntTSL 5 BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 TBC1D29-202ENST00000580161 3018 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 CHERP-203ENST00000546361 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC8.21□□□□□ -1.1
CHKB-CPT1BH3BT56 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CHKB-CPT1BH3BT56 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC8.2□□□□□ -1.1
CHKB-CPT1BH3BT56 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC8.2□□□□□ -1.1
CHKB-CPT1BH3BT56 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CHKB-CPT1BH3BT56 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
CHKB-CPT1BH3BT56 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
CHKB-CPT1BH3BT56 HS6ST2-202ENST00000370836 4441 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
CHKB-CPT1BH3BT56 USP4-203ENST00000415188 1454 ntTSL 3 BASIC8.2□□□□□ -1.1
CHKB-CPT1BH3BT56 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms