Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 CICP16-201ENST00000502609 2813 ntBASIC12.8□□□□□ -0.36
TMEM235A6NFC5 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 PPT1-213ENST00000641319 2388 ntBASIC12.8□□□□□ -0.36
TMEM235A6NFC5 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 AC099521.3-201ENST00000624251 2938 ntBASIC12.8□□□□□ -0.36
TMEM235A6NFC5 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 TCAF1P1-201ENST00000414990 2232 ntBASIC12.8□□□□□ -0.36
TMEM235A6NFC5 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 MTDHP5-201ENST00000598980 586 ntBASIC12.8□□□□□ -0.36
TMEM235A6NFC5 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 AC005562.1-201ENST00000583030 3219 ntBASIC12.8□□□□□ -0.36
TMEM235A6NFC5 DGCR9-201ENST00000609630 2415 ntBASIC12.8□□□□□ -0.36
TMEM235A6NFC5 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM235A6NFC5 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 RPL37AP1-201ENST00000412502 279 ntBASIC12.79□□□□□ -0.36
TMEM235A6NFC5 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 AC000095.1-201ENST00000603208 874 ntBASIC12.79□□□□□ -0.36
TMEM235A6NFC5 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.79□□□□□ -0.36
TMEM235A6NFC5 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM235A6NFC5 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms