Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 ALG1L8P-201ENST00000533887 760 ntBASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 SAMD11P1-201ENST00000571429 661 ntBASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 RN7SL828P-201ENST00000607615 303 ntBASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 AL133215.2-201ENST00000609242 977 ntBASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 AL121723.1-201ENST00000445194 1519 ntBASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 KRT8P22-201ENST00000562317 1415 ntBASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 AL365181.3-201ENST00000605886 3222 ntBASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
MEIS3P1A6NDR6 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 INE2-201ENST00000630399 1874 ntBASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 AC090505.1-201ENST00000430515 1834 ntBASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MEIS3P1A6NDR6 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
MEIS3P1A6NDR6 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms