Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
COMMD3-BMI1R4GMX3 AC092667.1-201ENST00000434301 2586 ntBASIC21.38■■□□□ 1.01
COMMD3-BMI1R4GMX3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COMMD3-BMI1R4GMX3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COMMD3-BMI1R4GMX3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COMMD3-BMI1R4GMX3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COMMD3-BMI1R4GMX3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.37■■□□□ 1.01
COMMD3-BMI1R4GMX3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.37■■□□□ 1.01
COMMD3-BMI1R4GMX3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COMMD3-BMI1R4GMX3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COMMD3-BMI1R4GMX3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COMMD3-BMI1R4GMX3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COMMD3-BMI1R4GMX3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.36■■□□□ 1.01
COMMD3-BMI1R4GMX3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COMMD3-BMI1R4GMX3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.36■■□□□ 1.01
COMMD3-BMI1R4GMX3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COMMD3-BMI1R4GMX3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
COMMD3-BMI1R4GMX3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
COMMD3-BMI1R4GMX3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.36■■□□□ 1.01
COMMD3-BMI1R4GMX3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.36■■□□□ 1.01
COMMD3-BMI1R4GMX3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COMMD3-BMI1R4GMX3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
COMMD3-BMI1R4GMX3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.35■■□□□ 1.01
COMMD3-BMI1R4GMX3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COMMD3-BMI1R4GMX3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
COMMD3-BMI1R4GMX3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
COMMD3-BMI1R4GMX3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
COMMD3-BMI1R4GMX3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COMMD3-BMI1R4GMX3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
COMMD3-BMI1R4GMX3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.35■■□□□ 1.01
COMMD3-BMI1R4GMX3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.35■■□□□ 1.01
COMMD3-BMI1R4GMX3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COMMD3-BMI1R4GMX3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COMMD3-BMI1R4GMX3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COMMD3-BMI1R4GMX3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.34■■□□□ 1.01
COMMD3-BMI1R4GMX3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COMMD3-BMI1R4GMX3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COMMD3-BMI1R4GMX3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COMMD3-BMI1R4GMX3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COMMD3-BMI1R4GMX3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
COMMD3-BMI1R4GMX3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
COMMD3-BMI1R4GMX3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
COMMD3-BMI1R4GMX3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COMMD3-BMI1R4GMX3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COMMD3-BMI1R4GMX3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COMMD3-BMI1R4GMX3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
COMMD3-BMI1R4GMX3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COMMD3-BMI1R4GMX3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COMMD3-BMI1R4GMX3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COMMD3-BMI1R4GMX3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
COMMD3-BMI1R4GMX3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COMMD3-BMI1R4GMX3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
COMMD3-BMI1R4GMX3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.33■■□□□ 1
COMMD3-BMI1R4GMX3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.33■■□□□ 1
COMMD3-BMI1R4GMX3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.33■■□□□ 1
COMMD3-BMI1R4GMX3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
COMMD3-BMI1R4GMX3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COMMD3-BMI1R4GMX3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.33■■□□□ 1
COMMD3-BMI1R4GMX3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.32■■□□□ 1
COMMD3-BMI1R4GMX3 AC073130.3-201ENST00000624389 2278 ntBASIC21.32■■□□□ 1
COMMD3-BMI1R4GMX3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COMMD3-BMI1R4GMX3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
COMMD3-BMI1R4GMX3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COMMD3-BMI1R4GMX3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
COMMD3-BMI1R4GMX3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.32■■□□□ 1
COMMD3-BMI1R4GMX3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.32■■□□□ 1
COMMD3-BMI1R4GMX3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
COMMD3-BMI1R4GMX3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COMMD3-BMI1R4GMX3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COMMD3-BMI1R4GMX3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
COMMD3-BMI1R4GMX3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
COMMD3-BMI1R4GMX3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COMMD3-BMI1R4GMX3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.31■■□□□ 1
COMMD3-BMI1R4GMX3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
COMMD3-BMI1R4GMX3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.31■■□□□ 1
COMMD3-BMI1R4GMX3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
COMMD3-BMI1R4GMX3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.31■■□□□ 1
COMMD3-BMI1R4GMX3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
COMMD3-BMI1R4GMX3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.31■■□□□ 1
COMMD3-BMI1R4GMX3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COMMD3-BMI1R4GMX3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COMMD3-BMI1R4GMX3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.3■■□□□ 1
COMMD3-BMI1R4GMX3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
COMMD3-BMI1R4GMX3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.3■■□□□ 1
COMMD3-BMI1R4GMX3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COMMD3-BMI1R4GMX3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COMMD3-BMI1R4GMX3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.3■■□□□ 1
COMMD3-BMI1R4GMX3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.3■■□□□ 1
COMMD3-BMI1R4GMX3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.3■■□□□ 1
COMMD3-BMI1R4GMX3 MIR7108-201ENST00000614319 87 ntBASIC21.3■■□□□ 1
COMMD3-BMI1R4GMX3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.3■■□□□ 1
COMMD3-BMI1R4GMX3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
COMMD3-BMI1R4GMX3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COMMD3-BMI1R4GMX3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.3■■□□□ 1
COMMD3-BMI1R4GMX3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
COMMD3-BMI1R4GMX3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.3■■□□□ 1
COMMD3-BMI1R4GMX3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.3■■□□□ 1
COMMD3-BMI1R4GMX3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.29■■□□□ 1
COMMD3-BMI1R4GMX3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.29■■□□□ 1
COMMD3-BMI1R4GMX3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms