Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHA3Q9Y5H8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHA3Q9Y5H8 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHA3Q9Y5H8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
PCDHA3Q9Y5H8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.95■■□□□ 1.43
PCDHA3Q9Y5H8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
PCDHA3Q9Y5H8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.95■■□□□ 1.42
PCDHA3Q9Y5H8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHA3Q9Y5H8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.95■■□□□ 1.42
PCDHA3Q9Y5H8 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.95■■□□□ 1.42
PCDHA3Q9Y5H8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.95■■□□□ 1.42
PCDHA3Q9Y5H8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.95■■□□□ 1.42
PCDHA3Q9Y5H8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
PCDHA3Q9Y5H8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHA3Q9Y5H8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHA3Q9Y5H8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHA3Q9Y5H8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.94■■□□□ 1.42
PCDHA3Q9Y5H8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.94■■□□□ 1.42
PCDHA3Q9Y5H8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHA3Q9Y5H8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHA3Q9Y5H8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHA3Q9Y5H8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
PCDHA3Q9Y5H8 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
PCDHA3Q9Y5H8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
PCDHA3Q9Y5H8 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHA3Q9Y5H8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHA3Q9Y5H8 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHA3Q9Y5H8 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHA3Q9Y5H8 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHA3Q9Y5H8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHA3Q9Y5H8 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHA3Q9Y5H8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.93■■□□□ 1.42
PCDHA3Q9Y5H8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHA3Q9Y5H8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHA3Q9Y5H8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
PCDHA3Q9Y5H8 AC092068.2-201ENST00000590491 1708 ntBASIC23.93■■□□□ 1.42
PCDHA3Q9Y5H8 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHA3Q9Y5H8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.93■■□□□ 1.42
PCDHA3Q9Y5H8 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHA3Q9Y5H8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.92■■□□□ 1.42
PCDHA3Q9Y5H8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
PCDHA3Q9Y5H8 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHA3Q9Y5H8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHA3Q9Y5H8 AC079834.2-201ENST00000609776 1949 ntBASIC23.92■■□□□ 1.42
PCDHA3Q9Y5H8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHA3Q9Y5H8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHA3Q9Y5H8 AC131274.2-201ENST00000580697 1507 ntBASIC23.91■■□□□ 1.42
PCDHA3Q9Y5H8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHA3Q9Y5H8 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHA3Q9Y5H8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.91■■□□□ 1.42
PCDHA3Q9Y5H8 AC022616.5-201ENST00000518796 181 ntBASIC23.91■■□□□ 1.42
PCDHA3Q9Y5H8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHA3Q9Y5H8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHA3Q9Y5H8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHA3Q9Y5H8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHA3Q9Y5H8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHA3Q9Y5H8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHA3Q9Y5H8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.9■■□□□ 1.42
PCDHA3Q9Y5H8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHA3Q9Y5H8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHA3Q9Y5H8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHA3Q9Y5H8 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHA3Q9Y5H8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHA3Q9Y5H8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.89■■□□□ 1.41
PCDHA3Q9Y5H8 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.89■■□□□ 1.41
PCDHA3Q9Y5H8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHA3Q9Y5H8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHA3Q9Y5H8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHA3Q9Y5H8 DUSP8P3-201ENST00000399571 1760 ntBASIC23.88■■□□□ 1.41
PCDHA3Q9Y5H8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.88■■□□□ 1.41
PCDHA3Q9Y5H8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
PCDHA3Q9Y5H8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHA3Q9Y5H8 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.88■■□□□ 1.41
PCDHA3Q9Y5H8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.88■■□□□ 1.41
PCDHA3Q9Y5H8 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHA3Q9Y5H8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
PCDHA3Q9Y5H8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
PCDHA3Q9Y5H8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.87■■□□□ 1.41
PCDHA3Q9Y5H8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
PCDHA3Q9Y5H8 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.87■■□□□ 1.41
PCDHA3Q9Y5H8 DUX4L18-201ENST00000553347 1267 ntBASIC23.87■■□□□ 1.41
PCDHA3Q9Y5H8 ABHD17AP5-201ENST00000580133 923 ntBASIC23.87■■□□□ 1.41
PCDHA3Q9Y5H8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHA3Q9Y5H8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.87■■□□□ 1.41
PCDHA3Q9Y5H8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHA3Q9Y5H8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.87■■□□□ 1.41
PCDHA3Q9Y5H8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHA3Q9Y5H8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
PCDHA3Q9Y5H8 NTF6A-201ENST00000591175 560 ntBASIC23.86■■□□□ 1.41
PCDHA3Q9Y5H8 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.86■■□□□ 1.41
PCDHA3Q9Y5H8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHA3Q9Y5H8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHA3Q9Y5H8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.85■■□□□ 1.41
PCDHA3Q9Y5H8 AC139795.1-202ENST00000500444 432 ntBASIC23.85■■□□□ 1.41
PCDHA3Q9Y5H8 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHA3Q9Y5H8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.85■■□□□ 1.41
PCDHA3Q9Y5H8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
PCDHA3Q9Y5H8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHA3Q9Y5H8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHA3Q9Y5H8 ALDH1A3-203ENST00000557963 1670 ntBASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms