Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDHGA4Q9Y5G9 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGA4Q9Y5G9 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDHGA4Q9Y5G9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHGA4Q9Y5G9 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGA4Q9Y5G9 AL136116.3-201ENST00000402907 1138 ntBASIC22.43■■□□□ 1.18
PCDHGA4Q9Y5G9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
PCDHGA4Q9Y5G9 AC011551.1-201ENST00000614101 683 ntBASIC22.43■■□□□ 1.18
PCDHGA4Q9Y5G9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGA4Q9Y5G9 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGA4Q9Y5G9 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGA4Q9Y5G9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGA4Q9Y5G9 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHGA4Q9Y5G9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGA4Q9Y5G9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHGA4Q9Y5G9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.42■■□□□ 1.18
PCDHGA4Q9Y5G9 AC090877.2-201ENST00000558441 1738 ntBASIC22.42■■□□□ 1.18
PCDHGA4Q9Y5G9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
PCDHGA4Q9Y5G9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA4Q9Y5G9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
PCDHGA4Q9Y5G9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA4Q9Y5G9 AL024507.2-201ENST00000606070 2574 ntBASIC22.41■■□□□ 1.18
PCDHGA4Q9Y5G9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
PCDHGA4Q9Y5G9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.41■■□□□ 1.18
PCDHGA4Q9Y5G9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
PCDHGA4Q9Y5G9 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA4Q9Y5G9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
PCDHGA4Q9Y5G9 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA4Q9Y5G9 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
PCDHGA4Q9Y5G9 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGA4Q9Y5G9 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDHGA4Q9Y5G9 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGA4Q9Y5G9 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDHGA4Q9Y5G9 AC138932.3-201ENST00000567634 1902 ntBASIC22.4■■□□□ 1.18
PCDHGA4Q9Y5G9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
PCDHGA4Q9Y5G9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDHGA4Q9Y5G9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.4■■□□□ 1.18
PCDHGA4Q9Y5G9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDHGA4Q9Y5G9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
PCDHGA4Q9Y5G9 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGA4Q9Y5G9 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDHGA4Q9Y5G9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.39■■□□□ 1.18
PCDHGA4Q9Y5G9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHGA4Q9Y5G9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGA4Q9Y5G9 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGA4Q9Y5G9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHGA4Q9Y5G9 MIR4281-201ENST00000580852 62 ntBASIC22.39■■□□□ 1.17
PCDHGA4Q9Y5G9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHGA4Q9Y5G9 AL117332.1-201ENST00000622628 974 ntBASIC22.39■■□□□ 1.17
PCDHGA4Q9Y5G9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.39■■□□□ 1.17
PCDHGA4Q9Y5G9 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGA4Q9Y5G9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHGA4Q9Y5G9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHGA4Q9Y5G9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHGA4Q9Y5G9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA4Q9Y5G9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA4Q9Y5G9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
PCDHGA4Q9Y5G9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDHGA4Q9Y5G9 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA4Q9Y5G9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDHGA4Q9Y5G9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA4Q9Y5G9 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA4Q9Y5G9 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
PCDHGA4Q9Y5G9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA4Q9Y5G9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
PCDHGA4Q9Y5G9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.37■■□□□ 1.17
PCDHGA4Q9Y5G9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.37■■□□□ 1.17
PCDHGA4Q9Y5G9 AC010997.5-201ENST00000609182 354 ntBASIC22.37■■□□□ 1.17
PCDHGA4Q9Y5G9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.37■■□□□ 1.17
PCDHGA4Q9Y5G9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA4Q9Y5G9 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGA4Q9Y5G9 AP003733.4-201ENST00000623785 1697 ntBASIC22.36■■□□□ 1.17
PCDHGA4Q9Y5G9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGA4Q9Y5G9 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDHGA4Q9Y5G9 AC110285.6-201ENST00000617652 491 ntBASIC22.36■■□□□ 1.17
PCDHGA4Q9Y5G9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGA4Q9Y5G9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDHGA4Q9Y5G9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGA4Q9Y5G9 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA4Q9Y5G9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHGA4Q9Y5G9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
PCDHGA4Q9Y5G9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA4Q9Y5G9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA4Q9Y5G9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA4Q9Y5G9 MIR3621-201ENST00000580529 85 ntBASIC22.35■■□□□ 1.17
PCDHGA4Q9Y5G9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA4Q9Y5G9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHGA4Q9Y5G9 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA4Q9Y5G9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA4Q9Y5G9 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA4Q9Y5G9 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDHGA4Q9Y5G9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDHGA4Q9Y5G9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGA4Q9Y5G9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGA4Q9Y5G9 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGA4Q9Y5G9 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGA4Q9Y5G9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.34■■□□□ 1.17
PCDHGA4Q9Y5G9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGA4Q9Y5G9 MTDHP2-201ENST00000601468 714 ntBASIC22.34■■□□□ 1.17
PCDHGA4Q9Y5G9 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms