Protein–RNA interactions for Protein: Q9Y570

PPME1, Protein phosphatase methylesterase 1, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1Q9Y570 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
PPME1Q9Y570 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
PPME1Q9Y570 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
PPME1Q9Y570 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.38■■□□□ 1.65
PPME1Q9Y570 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PPME1Q9Y570 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PPME1Q9Y570 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PPME1Q9Y570 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PPME1Q9Y570 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PPME1Q9Y570 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PPME1Q9Y570 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PPME1Q9Y570 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PPME1Q9Y570 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
PPME1Q9Y570 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.37■■□□□ 1.65
PPME1Q9Y570 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.36■■□□□ 1.65
PPME1Q9Y570 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.36■■□□□ 1.65
PPME1Q9Y570 AC141586.4-201ENST00000624558 1573 ntBASIC25.36■■□□□ 1.65
PPME1Q9Y570 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC25.36■■□□□ 1.65
PPME1Q9Y570 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.36■■□□□ 1.65
PPME1Q9Y570 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
PPME1Q9Y570 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PPME1Q9Y570 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.35■■□□□ 1.65
PPME1Q9Y570 MIR4466-201ENST00000606121 54 ntBASIC25.35■■□□□ 1.65
PPME1Q9Y570 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
PPME1Q9Y570 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
PPME1Q9Y570 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PPME1Q9Y570 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PPME1Q9Y570 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.34■■□□□ 1.65
PPME1Q9Y570 ALDH1A3-203ENST00000557963 1670 ntBASIC25.34■■□□□ 1.65
PPME1Q9Y570 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
PPME1Q9Y570 AL136116.3-201ENST00000402907 1138 ntBASIC25.34■■□□□ 1.65
PPME1Q9Y570 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PPME1Q9Y570 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.34■■□□□ 1.65
PPME1Q9Y570 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PPME1Q9Y570 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PPME1Q9Y570 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.33■■□□□ 1.65
PPME1Q9Y570 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PPME1Q9Y570 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PPME1Q9Y570 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
PPME1Q9Y570 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
PPME1Q9Y570 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
PPME1Q9Y570 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.32■■□□□ 1.64
PPME1Q9Y570 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
PPME1Q9Y570 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.32■■□□□ 1.64
PPME1Q9Y570 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
PPME1Q9Y570 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.32■■□□□ 1.64
PPME1Q9Y570 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PPME1Q9Y570 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.32■■□□□ 1.64
PPME1Q9Y570 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PPME1Q9Y570 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PPME1Q9Y570 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.31■■□□□ 1.64
PPME1Q9Y570 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PPME1Q9Y570 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.31■■□□□ 1.64
PPME1Q9Y570 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.31■■□□□ 1.64
PPME1Q9Y570 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.31■■□□□ 1.64
PPME1Q9Y570 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PPME1Q9Y570 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.31■■□□□ 1.64
PPME1Q9Y570 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
PPME1Q9Y570 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.3■■□□□ 1.64
PPME1Q9Y570 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PPME1Q9Y570 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC25.3■■□□□ 1.64
PPME1Q9Y570 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PPME1Q9Y570 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PPME1Q9Y570 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.3■■□□□ 1.64
PPME1Q9Y570 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PPME1Q9Y570 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PPME1Q9Y570 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.29■■□□□ 1.64
PPME1Q9Y570 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PPME1Q9Y570 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PPME1Q9Y570 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PPME1Q9Y570 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PPME1Q9Y570 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
PPME1Q9Y570 AC135731.1-201ENST00000569415 2548 ntBASIC25.28■■□□□ 1.64
PPME1Q9Y570 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PPME1Q9Y570 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PPME1Q9Y570 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PPME1Q9Y570 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
PPME1Q9Y570 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PPME1Q9Y570 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.27■■□□□ 1.64
PPME1Q9Y570 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.27■■□□□ 1.64
PPME1Q9Y570 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PPME1Q9Y570 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
PPME1Q9Y570 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PPME1Q9Y570 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.27■■□□□ 1.64
PPME1Q9Y570 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.26■■□□□ 1.63
PPME1Q9Y570 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PPME1Q9Y570 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PPME1Q9Y570 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PPME1Q9Y570 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
PPME1Q9Y570 SRD5A1P1-201ENST00000442297 786 ntBASIC25.26■■□□□ 1.63
PPME1Q9Y570 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.26■■□□□ 1.63
PPME1Q9Y570 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.26■■□□□ 1.63
PPME1Q9Y570 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.26■■□□□ 1.63
PPME1Q9Y570 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
PPME1Q9Y570 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PPME1Q9Y570 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PPME1Q9Y570 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PPME1Q9Y570 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.26■■□□□ 1.63
PPME1Q9Y570 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PPME1Q9Y570 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.26■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms