Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
PTPN22Q9Y2R2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
PTPN22Q9Y2R2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
PTPN22Q9Y2R2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
PTPN22Q9Y2R2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PTPN22Q9Y2R2 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PTPN22Q9Y2R2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC26.41■■□□□ 1.82
PTPN22Q9Y2R2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC26.41■■□□□ 1.82
PTPN22Q9Y2R2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
PTPN22Q9Y2R2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC26.41■■□□□ 1.82
PTPN22Q9Y2R2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PTPN22Q9Y2R2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
PTPN22Q9Y2R2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PTPN22Q9Y2R2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC26.4■■□□□ 1.82
PTPN22Q9Y2R2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC26.4■■□□□ 1.82
PTPN22Q9Y2R2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PTPN22Q9Y2R2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PTPN22Q9Y2R2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.4■■□□□ 1.82
PTPN22Q9Y2R2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PTPN22Q9Y2R2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PTPN22Q9Y2R2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
PTPN22Q9Y2R2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PTPN22Q9Y2R2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
PTPN22Q9Y2R2 BX842568.3-201ENST00000418104 571 ntBASIC26.39■■□□□ 1.82
PTPN22Q9Y2R2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
PTPN22Q9Y2R2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC26.39■■□□□ 1.82
PTPN22Q9Y2R2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC26.39■■□□□ 1.82
PTPN22Q9Y2R2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
PTPN22Q9Y2R2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.39■■□□□ 1.81
PTPN22Q9Y2R2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
PTPN22Q9Y2R2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
PTPN22Q9Y2R2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.39■■□□□ 1.81
PTPN22Q9Y2R2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PTPN22Q9Y2R2 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PTPN22Q9Y2R2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PTPN22Q9Y2R2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PTPN22Q9Y2R2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.38■■□□□ 1.81
PTPN22Q9Y2R2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PTPN22Q9Y2R2 HLA-L-209ENST00000420110 1011 ntBASIC26.38■■□□□ 1.81
PTPN22Q9Y2R2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PTPN22Q9Y2R2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PTPN22Q9Y2R2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PTPN22Q9Y2R2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC26.38■■□□□ 1.81
PTPN22Q9Y2R2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.38■■□□□ 1.81
PTPN22Q9Y2R2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PTPN22Q9Y2R2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PTPN22Q9Y2R2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PTPN22Q9Y2R2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
PTPN22Q9Y2R2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
PTPN22Q9Y2R2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.37■■□□□ 1.81
PTPN22Q9Y2R2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.36■■□□□ 1.81
PTPN22Q9Y2R2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PTPN22Q9Y2R2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
PTPN22Q9Y2R2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
PTPN22Q9Y2R2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC26.36■■□□□ 1.81
PTPN22Q9Y2R2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PTPN22Q9Y2R2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PTPN22Q9Y2R2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PTPN22Q9Y2R2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
PTPN22Q9Y2R2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PTPN22Q9Y2R2 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PTPN22Q9Y2R2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC26.35■■□□□ 1.81
PTPN22Q9Y2R2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PTPN22Q9Y2R2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PTPN22Q9Y2R2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC26.35■■□□□ 1.81
PTPN22Q9Y2R2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PTPN22Q9Y2R2 REST-206ENST00000612429 1376 ntTSL 5 BASIC26.34■■□□□ 1.81
PTPN22Q9Y2R2 REST-207ENST00000616975 1370 ntTSL 5 BASIC26.34■■□□□ 1.81
PTPN22Q9Y2R2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PTPN22Q9Y2R2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.34■■□□□ 1.81
PTPN22Q9Y2R2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC26.34■■□□□ 1.81
PTPN22Q9Y2R2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC26.34■■□□□ 1.81
PTPN22Q9Y2R2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC26.34■■□□□ 1.81
PTPN22Q9Y2R2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PTPN22Q9Y2R2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC26.33■■□□□ 1.81
PTPN22Q9Y2R2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PTPN22Q9Y2R2 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PTPN22Q9Y2R2 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PTPN22Q9Y2R2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
PTPN22Q9Y2R2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
PTPN22Q9Y2R2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.33■■□□□ 1.8
PTPN22Q9Y2R2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.8
PTPN22Q9Y2R2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
PTPN22Q9Y2R2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PTPN22Q9Y2R2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.32■■□□□ 1.8
PTPN22Q9Y2R2 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PTPN22Q9Y2R2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PTPN22Q9Y2R2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
PTPN22Q9Y2R2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PTPN22Q9Y2R2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC26.32■■□□□ 1.8
PTPN22Q9Y2R2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
PTPN22Q9Y2R2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PTPN22Q9Y2R2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PTPN22Q9Y2R2 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.31■■□□□ 1.8
PTPN22Q9Y2R2 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PTPN22Q9Y2R2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.31■■□□□ 1.8
PTPN22Q9Y2R2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.31■■□□□ 1.8
PTPN22Q9Y2R2 NME4-202ENST00000382940 766 ntTSL 3 BASIC26.31■■□□□ 1.8
PTPN22Q9Y2R2 GXYLT1P2-201ENST00000433312 1230 ntBASIC26.31■■□□□ 1.8
PTPN22Q9Y2R2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms