Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.05■□□□□ 0.96
NPIPA1Q9UND3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NPIPA1Q9UND3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPIPA1Q9UND3 AL512631.2-201ENST00000604634 923 ntBASIC21.05■□□□□ 0.96
NPIPA1Q9UND3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.05■□□□□ 0.96
NPIPA1Q9UND3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPA1Q9UND3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.04■□□□□ 0.96
NPIPA1Q9UND3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPA1Q9UND3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPA1Q9UND3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPA1Q9UND3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.04■□□□□ 0.96
NPIPA1Q9UND3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.04■□□□□ 0.96
NPIPA1Q9UND3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.04■□□□□ 0.96
NPIPA1Q9UND3 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.04■□□□□ 0.96
NPIPA1Q9UND3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPA1Q9UND3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.04■□□□□ 0.96
NPIPA1Q9UND3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPA1Q9UND3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPA1Q9UND3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPA1Q9UND3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPA1Q9UND3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.03■□□□□ 0.96
NPIPA1Q9UND3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPIPA1Q9UND3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPIPA1Q9UND3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.03■□□□□ 0.96
NPIPA1Q9UND3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.03■□□□□ 0.96
NPIPA1Q9UND3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NPIPA1Q9UND3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPIPA1Q9UND3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NPIPA1Q9UND3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.03■□□□□ 0.96
NPIPA1Q9UND3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPIPA1Q9UND3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPIPA1Q9UND3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NPIPA1Q9UND3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPIPA1Q9UND3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPIPA1Q9UND3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NPIPA1Q9UND3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.02■□□□□ 0.96
NPIPA1Q9UND3 AL139125.2-201ENST00000623134 1869 ntBASIC21.02■□□□□ 0.96
NPIPA1Q9UND3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NPIPA1Q9UND3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPIPA1Q9UND3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.01■□□□□ 0.95
NPIPA1Q9UND3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.01■□□□□ 0.95
NPIPA1Q9UND3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPIPA1Q9UND3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPIPA1Q9UND3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPIPA1Q9UND3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPIPA1Q9UND3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPIPA1Q9UND3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.01■□□□□ 0.95
NPIPA1Q9UND3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.01■□□□□ 0.95
NPIPA1Q9UND3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NPIPA1Q9UND3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NPIPA1Q9UND3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21■□□□□ 0.95
NPIPA1Q9UND3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NPIPA1Q9UND3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21■□□□□ 0.95
NPIPA1Q9UND3 MIR6089-201ENST00000616698 64 ntBASIC21■□□□□ 0.95
NPIPA1Q9UND3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NPIPA1Q9UND3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
NPIPA1Q9UND3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NPIPA1Q9UND3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NPIPA1Q9UND3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NPIPA1Q9UND3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
NPIPA1Q9UND3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.99■□□□□ 0.95
NPIPA1Q9UND3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPIPA1Q9UND3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.99■□□□□ 0.95
NPIPA1Q9UND3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.99■□□□□ 0.95
NPIPA1Q9UND3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NPIPA1Q9UND3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.99■□□□□ 0.95
NPIPA1Q9UND3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPIPA1Q9UND3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.98■□□□□ 0.95
NPIPA1Q9UND3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NPIPA1Q9UND3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NPIPA1Q9UND3 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.98■□□□□ 0.95
NPIPA1Q9UND3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPIPA1Q9UND3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.98■□□□□ 0.95
NPIPA1Q9UND3 AC005837.3-201ENST00000612163 286 ntBASIC20.98■□□□□ 0.95
NPIPA1Q9UND3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPIPA1Q9UND3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPIPA1Q9UND3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
NPIPA1Q9UND3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.97■□□□□ 0.95
NPIPA1Q9UND3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPIPA1Q9UND3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NPIPA1Q9UND3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NPIPA1Q9UND3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPIPA1Q9UND3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPIPA1Q9UND3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPIPA1Q9UND3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPIPA1Q9UND3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NPIPA1Q9UND3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NPIPA1Q9UND3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.97■□□□□ 0.95
NPIPA1Q9UND3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPIPA1Q9UND3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPIPA1Q9UND3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
NPIPA1Q9UND3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPIPA1Q9UND3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NPIPA1Q9UND3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
NPIPA1Q9UND3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.96■□□□□ 0.95
NPIPA1Q9UND3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.96■□□□□ 0.95
NPIPA1Q9UND3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPIPA1Q9UND3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.96■□□□□ 0.95
NPIPA1Q9UND3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPIPA1Q9UND3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms