Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.27■■□□□ 1.8
DDX41Q9UJV9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
DDX41Q9UJV9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
DDX41Q9UJV9 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
DDX41Q9UJV9 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
DDX41Q9UJV9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
DDX41Q9UJV9 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
DDX41Q9UJV9 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.26■■□□□ 1.79
DDX41Q9UJV9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
DDX41Q9UJV9 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
DDX41Q9UJV9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
DDX41Q9UJV9 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.26■■□□□ 1.79
DDX41Q9UJV9 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
DDX41Q9UJV9 AL512631.2-201ENST00000604634 923 ntBASIC26.26■■□□□ 1.79
DDX41Q9UJV9 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
DDX41Q9UJV9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
DDX41Q9UJV9 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
DDX41Q9UJV9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
DDX41Q9UJV9 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
DDX41Q9UJV9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
DDX41Q9UJV9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
DDX41Q9UJV9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.25■■□□□ 1.79
DDX41Q9UJV9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.25■■□□□ 1.79
DDX41Q9UJV9 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
DDX41Q9UJV9 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
DDX41Q9UJV9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
DDX41Q9UJV9 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
DDX41Q9UJV9 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
DDX41Q9UJV9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
DDX41Q9UJV9 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.24■■□□□ 1.79
DDX41Q9UJV9 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.24■■□□□ 1.79
DDX41Q9UJV9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
DDX41Q9UJV9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
DDX41Q9UJV9 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
DDX41Q9UJV9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
DDX41Q9UJV9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.23■■□□□ 1.79
DDX41Q9UJV9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.23■■□□□ 1.79
DDX41Q9UJV9 AL139246.5-201ENST00000606645 996 ntBASIC26.23■■□□□ 1.79
DDX41Q9UJV9 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
DDX41Q9UJV9 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
DDX41Q9UJV9 SLC6A10P-202ENST00000431994 2058 ntBASIC26.23■■□□□ 1.79
DDX41Q9UJV9 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
DDX41Q9UJV9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.22■■□□□ 1.79
DDX41Q9UJV9 MIR638-201ENST00000385237 100 ntBASIC26.22■■□□□ 1.79
DDX41Q9UJV9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.22■■□□□ 1.79
DDX41Q9UJV9 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
DDX41Q9UJV9 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
DDX41Q9UJV9 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
DDX41Q9UJV9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
DDX41Q9UJV9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.21■■□□□ 1.79
DDX41Q9UJV9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC26.21■■□□□ 1.79
DDX41Q9UJV9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
DDX41Q9UJV9 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
DDX41Q9UJV9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
DDX41Q9UJV9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
DDX41Q9UJV9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC26.2■■□□□ 1.79
DDX41Q9UJV9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
DDX41Q9UJV9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
DDX41Q9UJV9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.2■■□□□ 1.78
DDX41Q9UJV9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.2■■□□□ 1.78
DDX41Q9UJV9 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
DDX41Q9UJV9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC26.2■■□□□ 1.78
DDX41Q9UJV9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.2■■□□□ 1.78
DDX41Q9UJV9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
DDX41Q9UJV9 CLDN5-201ENST00000403084 2357 ntBASIC26.19■■□□□ 1.78
DDX41Q9UJV9 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
DDX41Q9UJV9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
DDX41Q9UJV9 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
DDX41Q9UJV9 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
DDX41Q9UJV9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.18■■□□□ 1.78
DDX41Q9UJV9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.18■■□□□ 1.78
DDX41Q9UJV9 AC079834.2-201ENST00000609776 1949 ntBASIC26.18■■□□□ 1.78
DDX41Q9UJV9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
DDX41Q9UJV9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
DDX41Q9UJV9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26.18■■□□□ 1.78
DDX41Q9UJV9 AC004448.1-201ENST00000458332 883 ntBASIC26.18■■□□□ 1.78
DDX41Q9UJV9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
DDX41Q9UJV9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
DDX41Q9UJV9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
DDX41Q9UJV9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.18■■□□□ 1.78
DDX41Q9UJV9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
DDX41Q9UJV9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
DDX41Q9UJV9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
DDX41Q9UJV9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
DDX41Q9UJV9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
DDX41Q9UJV9 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
DDX41Q9UJV9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC26.16■■□□□ 1.78
DDX41Q9UJV9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
DDX41Q9UJV9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.16■■□□□ 1.78
DDX41Q9UJV9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
DDX41Q9UJV9 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.16■■□□□ 1.78
DDX41Q9UJV9 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
DDX41Q9UJV9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
DDX41Q9UJV9 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
DDX41Q9UJV9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
DDX41Q9UJV9 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
DDX41Q9UJV9 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
DDX41Q9UJV9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
DDX41Q9UJV9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.15■■□□□ 1.78
DDX41Q9UJV9 AC110285.6-201ENST00000617652 491 ntBASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms