Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SDHAF3Q9NRP4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SDHAF3Q9NRP4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SDHAF3Q9NRP4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
SDHAF3Q9NRP4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.96■□□□□ 0.95
SDHAF3Q9NRP4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.96■□□□□ 0.95
SDHAF3Q9NRP4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SDHAF3Q9NRP4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SDHAF3Q9NRP4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SDHAF3Q9NRP4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SDHAF3Q9NRP4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SDHAF3Q9NRP4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SDHAF3Q9NRP4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SDHAF3Q9NRP4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SDHAF3Q9NRP4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SDHAF3Q9NRP4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.95■□□□□ 0.94
SDHAF3Q9NRP4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.95■□□□□ 0.94
SDHAF3Q9NRP4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SDHAF3Q9NRP4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SDHAF3Q9NRP4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SDHAF3Q9NRP4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.95■□□□□ 0.94
SDHAF3Q9NRP4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SDHAF3Q9NRP4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SDHAF3Q9NRP4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SDHAF3Q9NRP4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SDHAF3Q9NRP4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.94■□□□□ 0.94
SDHAF3Q9NRP4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.94■□□□□ 0.94
SDHAF3Q9NRP4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SDHAF3Q9NRP4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SDHAF3Q9NRP4 KRT16P3-201ENST00000439127 1283 ntBASIC20.93■□□□□ 0.94
SDHAF3Q9NRP4 UNC93B8-201ENST00000511903 705 ntBASIC20.93■□□□□ 0.94
SDHAF3Q9NRP4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.93■□□□□ 0.94
SDHAF3Q9NRP4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.93■□□□□ 0.94
SDHAF3Q9NRP4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.93■□□□□ 0.94
SDHAF3Q9NRP4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SDHAF3Q9NRP4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SDHAF3Q9NRP4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SDHAF3Q9NRP4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
SDHAF3Q9NRP4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SDHAF3Q9NRP4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.92■□□□□ 0.94
SDHAF3Q9NRP4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.92■□□□□ 0.94
SDHAF3Q9NRP4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SDHAF3Q9NRP4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SDHAF3Q9NRP4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SDHAF3Q9NRP4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SDHAF3Q9NRP4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SDHAF3Q9NRP4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SDHAF3Q9NRP4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.91■□□□□ 0.94
SDHAF3Q9NRP4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
SDHAF3Q9NRP4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SDHAF3Q9NRP4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SDHAF3Q9NRP4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.91■□□□□ 0.94
SDHAF3Q9NRP4 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.91■□□□□ 0.94
SDHAF3Q9NRP4 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.91■□□□□ 0.94
SDHAF3Q9NRP4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SDHAF3Q9NRP4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SDHAF3Q9NRP4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SDHAF3Q9NRP4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SDHAF3Q9NRP4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
SDHAF3Q9NRP4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SDHAF3Q9NRP4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.9■□□□□ 0.94
SDHAF3Q9NRP4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SDHAF3Q9NRP4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.9■□□□□ 0.94
SDHAF3Q9NRP4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SDHAF3Q9NRP4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.9■□□□□ 0.94
SDHAF3Q9NRP4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SDHAF3Q9NRP4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SDHAF3Q9NRP4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
SDHAF3Q9NRP4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
SDHAF3Q9NRP4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
SDHAF3Q9NRP4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.89■□□□□ 0.93
SDHAF3Q9NRP4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SDHAF3Q9NRP4 AC005703.6-201ENST00000623265 1329 ntBASIC20.89■□□□□ 0.93
SDHAF3Q9NRP4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SDHAF3Q9NRP4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.89■□□□□ 0.93
SDHAF3Q9NRP4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SDHAF3Q9NRP4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.89■□□□□ 0.93
SDHAF3Q9NRP4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SDHAF3Q9NRP4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SDHAF3Q9NRP4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SDHAF3Q9NRP4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SDHAF3Q9NRP4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SDHAF3Q9NRP4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SDHAF3Q9NRP4 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.88■□□□□ 0.93
SDHAF3Q9NRP4 MIR6724-1-201ENST00000616420 92 ntBASIC20.88■□□□□ 0.93
SDHAF3Q9NRP4 MIR6724-2-201ENST00000616483 92 ntBASIC20.88■□□□□ 0.93
SDHAF3Q9NRP4 MIR6724-4-201ENST00000617390 92 ntBASIC20.88■□□□□ 0.93
SDHAF3Q9NRP4 MIR6724-3-201ENST00000622482 92 ntBASIC20.88■□□□□ 0.93
SDHAF3Q9NRP4 ALDH1A3-203ENST00000557963 1670 ntBASIC20.88■□□□□ 0.93
SDHAF3Q9NRP4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.88■□□□□ 0.93
SDHAF3Q9NRP4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SDHAF3Q9NRP4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SDHAF3Q9NRP4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SDHAF3Q9NRP4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SDHAF3Q9NRP4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SDHAF3Q9NRP4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SDHAF3Q9NRP4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SDHAF3Q9NRP4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.87■□□□□ 0.93
SDHAF3Q9NRP4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.87■□□□□ 0.93
SDHAF3Q9NRP4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms