Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.68■□□□□ 0.9
HMG20AQ9NP66 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMG20AQ9NP66 AC016575.1-201ENST00000607026 382 ntBASIC20.68■□□□□ 0.9
HMG20AQ9NP66 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMG20AQ9NP66 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMG20AQ9NP66 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.67■□□□□ 0.9
HMG20AQ9NP66 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMG20AQ9NP66 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
HMG20AQ9NP66 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.67■□□□□ 0.9
HMG20AQ9NP66 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMG20AQ9NP66 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HMG20AQ9NP66 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.66■□□□□ 0.9
HMG20AQ9NP66 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
HMG20AQ9NP66 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
HMG20AQ9NP66 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.66■□□□□ 0.9
HMG20AQ9NP66 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMG20AQ9NP66 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMG20AQ9NP66 AL137060.1-201ENST00000618151 2648 ntBASIC20.66■□□□□ 0.9
HMG20AQ9NP66 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
HMG20AQ9NP66 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMG20AQ9NP66 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMG20AQ9NP66 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMG20AQ9NP66 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HMG20AQ9NP66 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
HMG20AQ9NP66 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMG20AQ9NP66 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMG20AQ9NP66 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.65■□□□□ 0.9
HMG20AQ9NP66 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMG20AQ9NP66 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.65■□□□□ 0.9
HMG20AQ9NP66 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HMG20AQ9NP66 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMG20AQ9NP66 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
HMG20AQ9NP66 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HMG20AQ9NP66 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HMG20AQ9NP66 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMG20AQ9NP66 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.64■□□□□ 0.89
HMG20AQ9NP66 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMG20AQ9NP66 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.64■□□□□ 0.89
HMG20AQ9NP66 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HMG20AQ9NP66 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.64■□□□□ 0.89
HMG20AQ9NP66 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
HMG20AQ9NP66 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMG20AQ9NP66 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMG20AQ9NP66 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMG20AQ9NP66 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMG20AQ9NP66 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMG20AQ9NP66 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMG20AQ9NP66 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMG20AQ9NP66 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.63■□□□□ 0.89
HMG20AQ9NP66 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMG20AQ9NP66 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
HMG20AQ9NP66 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.63■□□□□ 0.89
HMG20AQ9NP66 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMG20AQ9NP66 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
HMG20AQ9NP66 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
HMG20AQ9NP66 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
HMG20AQ9NP66 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMG20AQ9NP66 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HMG20AQ9NP66 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMG20AQ9NP66 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20AQ9NP66 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20AQ9NP66 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20AQ9NP66 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20AQ9NP66 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20AQ9NP66 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20AQ9NP66 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20AQ9NP66 AC126177.7-201ENST00000547904 679 ntBASIC20.62■□□□□ 0.89
HMG20AQ9NP66 MIR7108-201ENST00000614319 87 ntBASIC20.62■□□□□ 0.89
HMG20AQ9NP66 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.62■□□□□ 0.89
HMG20AQ9NP66 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20AQ9NP66 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
HMG20AQ9NP66 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20AQ9NP66 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20AQ9NP66 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20AQ9NP66 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20AQ9NP66 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20AQ9NP66 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMG20AQ9NP66 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMG20AQ9NP66 AL359504.2-201ENST00000605506 1601 ntBASIC20.61■□□□□ 0.89
HMG20AQ9NP66 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HMG20AQ9NP66 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
HMG20AQ9NP66 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
HMG20AQ9NP66 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.61■□□□□ 0.89
HMG20AQ9NP66 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
HMG20AQ9NP66 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.61■□□□□ 0.89
HMG20AQ9NP66 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.61■□□□□ 0.89
HMG20AQ9NP66 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HMG20AQ9NP66 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HMG20AQ9NP66 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMG20AQ9NP66 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMG20AQ9NP66 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
HMG20AQ9NP66 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
HMG20AQ9NP66 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.6■□□□□ 0.89
HMG20AQ9NP66 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
HMG20AQ9NP66 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMG20AQ9NP66 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HMG20AQ9NP66 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.6■□□□□ 0.89
HMG20AQ9NP66 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
HMG20AQ9NP66 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMG20AQ9NP66 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms