Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MSL2Q9HCI7 LINC00543-201ENST00000567234 1845 ntBASIC19.6■□□□□ 0.73
MSL2Q9HCI7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MSL2Q9HCI7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.6■□□□□ 0.73
MSL2Q9HCI7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
MSL2Q9HCI7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
MSL2Q9HCI7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.6■□□□□ 0.73
MSL2Q9HCI7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MSL2Q9HCI7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MSL2Q9HCI7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MSL2Q9HCI7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MSL2Q9HCI7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.6■□□□□ 0.73
MSL2Q9HCI7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MSL2Q9HCI7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
MSL2Q9HCI7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
MSL2Q9HCI7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MSL2Q9HCI7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MSL2Q9HCI7 KRT16P3-201ENST00000439127 1283 ntBASIC19.59■□□□□ 0.73
MSL2Q9HCI7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
MSL2Q9HCI7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.59■□□□□ 0.73
MSL2Q9HCI7 AC010997.5-201ENST00000609182 354 ntBASIC19.59■□□□□ 0.73
MSL2Q9HCI7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
MSL2Q9HCI7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MSL2Q9HCI7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MSL2Q9HCI7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.59■□□□□ 0.73
MSL2Q9HCI7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MSL2Q9HCI7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
MSL2Q9HCI7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MSL2Q9HCI7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MSL2Q9HCI7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.58■□□□□ 0.73
MSL2Q9HCI7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
MSL2Q9HCI7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.58■□□□□ 0.72
MSL2Q9HCI7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.58■□□□□ 0.72
MSL2Q9HCI7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.58■□□□□ 0.72
MSL2Q9HCI7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.58■□□□□ 0.72
MSL2Q9HCI7 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.58■□□□□ 0.72
MSL2Q9HCI7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
MSL2Q9HCI7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MSL2Q9HCI7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.58■□□□□ 0.72
MSL2Q9HCI7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
MSL2Q9HCI7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
MSL2Q9HCI7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MSL2Q9HCI7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.57■□□□□ 0.72
MSL2Q9HCI7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MSL2Q9HCI7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MSL2Q9HCI7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MSL2Q9HCI7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MSL2Q9HCI7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MSL2Q9HCI7 AL356441.2-201ENST00000443009 864 ntBASIC19.57■□□□□ 0.72
MSL2Q9HCI7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.57■□□□□ 0.72
MSL2Q9HCI7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
MSL2Q9HCI7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.57■□□□□ 0.72
MSL2Q9HCI7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
MSL2Q9HCI7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MSL2Q9HCI7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MSL2Q9HCI7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MSL2Q9HCI7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.56■□□□□ 0.72
MSL2Q9HCI7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
MSL2Q9HCI7 AC141586.4-201ENST00000624558 1573 ntBASIC19.56■□□□□ 0.72
MSL2Q9HCI7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MSL2Q9HCI7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MSL2Q9HCI7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MSL2Q9HCI7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MSL2Q9HCI7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MSL2Q9HCI7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.55■□□□□ 0.72
MSL2Q9HCI7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
MSL2Q9HCI7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.55■□□□□ 0.72
MSL2Q9HCI7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
MSL2Q9HCI7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.55■□□□□ 0.72
MSL2Q9HCI7 AL161729.1-201ENST00000604104 1402 ntBASIC19.55■□□□□ 0.72
MSL2Q9HCI7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.55■□□□□ 0.72
MSL2Q9HCI7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MSL2Q9HCI7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MSL2Q9HCI7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MSL2Q9HCI7 AC004812.2-201ENST00000611079 2094 ntBASIC19.55■□□□□ 0.72
MSL2Q9HCI7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MSL2Q9HCI7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.54■□□□□ 0.72
MSL2Q9HCI7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
MSL2Q9HCI7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
MSL2Q9HCI7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
MSL2Q9HCI7 MIR6722-201ENST00000617286 78 ntBASIC19.54■□□□□ 0.72
MSL2Q9HCI7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.54■□□□□ 0.72
MSL2Q9HCI7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MSL2Q9HCI7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
MSL2Q9HCI7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MSL2Q9HCI7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MSL2Q9HCI7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.53■□□□□ 0.72
MSL2Q9HCI7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.53■□□□□ 0.72
MSL2Q9HCI7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
MSL2Q9HCI7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.53■□□□□ 0.72
MSL2Q9HCI7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MSL2Q9HCI7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MSL2Q9HCI7 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.52■□□□□ 0.72
MSL2Q9HCI7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.52■□□□□ 0.72
MSL2Q9HCI7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.52■□□□□ 0.72
MSL2Q9HCI7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.52■□□□□ 0.72
MSL2Q9HCI7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
MSL2Q9HCI7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MSL2Q9HCI7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
MSL2Q9HCI7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms